Skip to content

Can you upgrade the OWLAPI version you are using in AML? #22

@marwa811

Description

@marwa811

I am trying to match two ontologies and one of them is the Core Ontology for Biology and Biomedicine (COB.owl) from Bioportal, it gives me an exception in loading the ontology step:
Exception in thread "main" org.semanticweb.owlapi.model.OWLRuntimeException: Property is not a named property. Check using the isAnonymous method before calling this method!
at uk.ac.manchester.cs.owl.owlapi.OWLObjectInverseOfImpl.asOWLObjectProperty(OWLObjectInverseOfImpl.java:118)
at aml.ontology.Ontology.getOWLRelationships(Ontology.java:1559)
at aml.ontology.Ontology.init(Ontology.java:414)
at aml.ontology.Ontology.(Ontology.java:157)
at aml.AML.openOntologies(AML.java:876)
at Main.main(Main.java:24)
When I search I found that COB.owl was created using OWLAPI version4 and AML is using OWLAPI version 3, as when I try to load the same ontology using OWLAPI version5 it loads successfully ... Also, using a relatively old version in AML causes some problems in using it. Can you upgrade the OWL API version you are using? or that is a difficult thing to do?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions