From 2c902df86b8ff22a33adba18629cdcff3e3f2896 Mon Sep 17 00:00:00 2001
From: Gabriel Blake Rodriguez <gbrauburn@gmail.com>
Date: Mon, 19 Apr 2021 10:41:38 -0400
Subject: [PATCH] Create Dockerfile

---
 Dockerfile | 21 +++++++++++++++++++++
 1 file changed, 21 insertions(+)
 create mode 100644 Dockerfile

diff --git a/Dockerfile b/Dockerfile
new file mode 100644
index 0000000..7a12b46
--- /dev/null
+++ b/Dockerfile
@@ -0,0 +1,21 @@
+FROM rocker/ropensci:latest
+FROM bioconductor/bioconductor_docker:devel
+
+RUN wget https://cran.r-project.org/src/contrib/Archive/nlme/nlme_3.1-123.tar.gz
+RUN R CMD INSTALL nlme_3.1-123.tar.gz
+
+RUN wget https://cran.r-project.org/src/contrib/Archive/Matrix/Matrix_1.2-17.tar.gz
+RUN R CMD INSTALL Matrix_1.2-17.tar.gz
+
+RUN install2.r openssl
+RUN install2.r swirl
+RUN install2.r --error \
+    hdf5r \
+    ## from bioconductor
+    && R -e "BiocManager::install('rhdf5', update=FALSE, ask=FALSE)"
+
+#Installs Qiime2 Package
+RUN installGithub.r jbisanz/qiime2R
+
+# To add data, create a seperate data.dat file in your working directory and run the line below without the '#'
+# ADD data.dat /home/rstudio/