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Merge pull request #2 from BrainLesion/1-feature-initial-setup #9

Merge pull request #2 from BrainLesion/1-feature-initial-setup

Merge pull request #2 from BrainLesion/1-feature-initial-setup #9

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
name: tests
on:
push:
branches: ["main"]
pull_request:
branches: ["main"]
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest] #, windows-latest, macos-latest] # Extend to your needs
python-version: ["3.9","3.10", "3.11", "3.12", "3.13"] # Extend to your needs
steps:
- uses: actions/checkout@v4
- name: Install poetry
run: pipx install poetry
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: "poetry"
- name: Install dependencies
run: poetry install --with dev
- name: Verify Python version
run: poetry run python --version
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
poetry run flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
poetry run flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
poetry run pytest --cov=stroke_segmentor --cov-report=xml --cov-report=term
# Add the following block to upload coverage to Codecov, requires a CODECOV_TOKEN secret to be set in the repository
# - name: Upload results to Codecov
# # Only upload to Codecov after a merge to the main branch
# if: github.ref == 'refs/heads/main' && github.event_name == 'push'
# uses: codecov/codecov-action@v5
# with:
# token: ${{ secrets.CODECOV_TOKEN }}
# files: ./coverage.xml