Skip to content

Broken table parser #35

@OBrink

Description

@OBrink

When running, the notebook examples/automatic_parsing_for_tables.ipynb, there are a couple of issues:

  1. One small thing: The path definition of the example table file is wrong. It should be path = "./data/table_example.csv" instead of path = "./example_tables/table_example_tkt_2.csv".
  2. The more urgent issue: It does not work. After defining the model in cell 2, the records in cell 3 are still empty. Something is broken there.

I am running the dockerised version of ChemDataExtractor 2.1.2. A colleague (@ViktorWeissenborn) has the exact same issue on an M2 MacBook. Could you give me a hint on how to make the table parser work again?

Thanks a lot!
Otto

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions