Skip to content

Commit 016ced9

Browse files
authored
fix: correctly name the field nextcladeQcMixedSitesScore instead of nextcladeQcMixedSites for the unparsed value (#9)
1 parent 04c0fb8 commit 016ced9

File tree

2 files changed

+4
-4
lines changed

2 files changed

+4
-4
lines changed

src/main/kotlin/org/genspectrum/ingest/proc/JoinSC2GisaidData.kt

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -97,7 +97,7 @@ private val oldToNewMetadataNames = listOf(
9797
"Nextclade_pango" to nextcladePangoLineage,
9898
"qc.overallScore" to "nextcladeQcOverallScore",
9999
"qc.missingData.score" to "nextcladeQcMissingDataScore",
100-
"qc.mixedSites.score" to "nextcladeQcMixedSites",
100+
"qc.mixedSites.score" to "nextcladeQcMixedSitesScore",
101101
"qc.privateMutations.score" to "nextcladeQcPrivateMutationsScore",
102102
"qc.snpClusters.score" to "nextcladeQcSnpClustersScore",
103103
"qc.frameShifts.score" to "nextcladeQcFrameShiftsScore",
@@ -141,7 +141,7 @@ private val selectedMetadata = setOf(
141141
"authors",
142142
"nextcladeQcOverallScore",
143143
"nextcladeQcMissingDataScore",
144-
"nextcladeQcMixedSites",
144+
"nextcladeQcMixedSitesScore",
145145
"nextcladeQcPrivateMutationsScore",
146146
"nextcladeQcSnpClustersScore",
147147
"nextcladeQcFrameShiftsScore",

src/main/kotlin/org/genspectrum/ingest/proc/JoinSC2NextstrainOpenData.kt

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -125,7 +125,7 @@ private val oldToNewMetadataNames = listOf(
125125
"ace2_binding" to "ace2Binding",
126126
"QC_overall_score" to "nextcladeQcOverallScore",
127127
"qc.missingData.score" to "nextcladeQcMissingDataScore",
128-
"qc.mixedSites.score" to "nextcladeQcMixedSites",
128+
"qc.mixedSites.score" to "nextcladeQcMixedSitesScore",
129129
"qc.privateMutations.score" to "nextcladeQcPrivateMutationsScore",
130130
"qc.snpClusters.score" to "nextcladeQcSnpClustersScore",
131131
"qc.frameShifts.score" to "nextcladeQcFrameShiftsScore",
@@ -169,7 +169,7 @@ private val selectedMetadata = setOf(
169169
"authors",
170170
"nextcladeQcOverallScore",
171171
"nextcladeQcMissingDataScore",
172-
"nextcladeQcMixedSites",
172+
"nextcladeQcMixedSitesScore",
173173
"nextcladeQcPrivateMutationsScore",
174174
"nextcladeQcSnpClustersScore",
175175
"nextcladeQcFrameShiftsScore",

0 commit comments

Comments
 (0)