[Type] Replace fixed_array with std::array" (#5620) Revert "[Type] Replace fixed_array with std::array (#5539)" This reverts commit 4c88c105703749fd836369d21e5e88a28710704a. commit 4c88c105703749fd836369d21e5e88a28710704a Author: Alex Bilger Date: Thu Jul 17 06:05:48 2025 +0200 [Type] Replace fixed_array with std::array (#5539) * [Type] Replace fixed_array with std::array * try to fix linux * try again * deduce type to fix compilation * remove support of derived types * remove tests * add tuple include * fix constructor * implement at function for Element * fix * fix image * fix unit test --------- Co-authored-by: Damien Marchal commit 4a1d4ef87ba3b125123ec3dc7ef67c2a27b72e1d Author: Alex Bilger Date: Wed Jul 16 10:17:41 2025 +0200 [Visual] introduce component to visualize a vector field (#5590) * introduce component to visualize a vector field * computeBBox * draw mode * add color * second vector field for forces * compare to zero Co-authored-by: Frederick Roy * fix computeBBox * Simpler Co-authored-by: Frederick Roy * Fix suggestion * Update Sofa/Component/Visual/src/sofa/component/visual/VisualVectorField.inl --------- Co-authored-by: Frederick Roy commit 47c2f88540cee37c2979b03dac46dce59dc32fbc Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Tue Jul 15 14:51:16 2025 +0200 [tools] generate stubfiles during packaging (#5222) * Add stubgen inside post-install-fixup * Fix stubgen by passing through a CPACK mechanism of Pre build script * Remove unnecessary changes * Remote last artifacts * Last cleaning * Add cpack option into main CMAKE * Add rpath for arm64 builder * Fix usage for 25.06 * Fix for new clone in build * Fix windows stubgen commit 32553d93faae0e289c5b31afc65d6d8feb436f8e Author: Hugo Date: Tue Jul 15 01:02:46 2025 +0200 [Helper] Add check in OptionGroup (#5602) commit 8cc44923d6920c9bb940913d5577d7806c70114e Author: Alex Bilger Date: Mon Jul 14 02:50:28 2025 +0200 [Visual] Introduce component to visualize a point cloud (#5588) * Introduce component to visualize a point cloud * draw indices * different draw mode for rigids * use fake spheres for performances * Fedora CI does not support conditional method definition based on a concept commit b70c4a2e67f0f3cf691ce758cf00a9e01138d945 Author: Alex Bilger Date: Mon Jul 14 00:51:31 2025 +0200 [Scene] Modernize DataDisplay scene (#5587) commit 9c7a5dca4cc6d9d1bcc0893269fe502fc11ed408 Author: Damien Marchal Date: Mon Jul 14 00:50:03 2025 +0200 [SofaImplicitField] Add python binding to ScalarField (#5559) * [SofaImplicitField] Add python binding to SofaImplicitField * Update example. commit ac2b2d888223a7704f7c9a12607252abb5281bbe Author: Alex Bilger Date: Thu Jul 10 07:56:35 2025 +0200 [Rendering2d] Support change of color scheme with callback (#5585) * [Rendering2d] Support change of color scheme with callback * fix commit 4d965119bfadb7a07b8612e6417923b25c19ebe2 Author: Alex Bilger Date: Thu Jul 10 01:24:22 2025 +0200 [Mapping.Linear] DistanceFromTargetMapping: Build indices list if not defined by user (#5584) [Mapping.Linear] Build indices list if not defined by user commit 578b0117a4f784bcee59d025e2ce3b136cae7cf5 Author: Alex Bilger Date: Thu Jul 10 00:42:43 2025 +0200 [Spring] Fix empty stiffness container (#5583) commit a970137c9153a3fd4627e9e014d0aac7c812ef01 Author: Hugo Date: Thu Jul 10 00:13:51 2025 +0200 [Core] Fix DisplayFlags with showCollision (#5598) commit 8fc6f913fea8dd5096147e62f15876fcc120efcb Author: Alex Bilger Date: Tue Jul 8 09:06:32 2025 +0200 [IO] Clean VTKExporter (#5577) - Raw pointers are now links - getPX, getPY etc are no longer used. Instead a link between data is used commit 28a8aa1b671a6edf108c5cfa2662493f4e4085d1 Author: Alex Bilger Date: Mon Jul 7 15:30:24 2025 +0200 [Core,StateContainer] Remove unused aliases (#5576) commit 694bc3cd2f3891460e3c69141095146f1198af61 Author: Alex Bilger Date: Mon Jul 7 06:42:24 2025 +0200 [Core] Visitor to have the same logic for backward and forward (#5569) commit 2343e22b81ca394520c6548d4c926f87cdd49951 Author: EulalieCoevoet Date: Fri Jul 4 02:06:07 2025 +0200 [Engine.Generate] New components to compute volume from meshes (#5525) * [Engine.Generate] new components to compute volume from meshes * [helper] ComponentChange: remove const for external plugins * Update Sofa/Component/Engine/Generate/src/sofa/component/engine/generate/VolumeFromTetrahedrons.cpp Co-authored-by: Alex Bilger * Update Sofa/Component/Engine/Generate/src/sofa/component/engine/generate/VolumeFromTriangles.cpp Co-authored-by: Alex Bilger * [Engine] VolumeFrom: updates header --------- Co-authored-by: Alex Bilger commit cb3b288215434494ed03c047a52e82015ad31012 Author: Frederick Roy Date: Thu Jul 3 21:33:58 2025 +0900 [Collision.Geometry] SphereModel: remove duplicated return statement (#5589) fix computebbox by removing duplicated return commit 99596dcf27bbb858328a2668fb925de83a8a7a8e Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Thu Jul 3 02:41:34 2025 -0400 [CollisionModel] Rename proximity data to contactDistance (#5518) * Rename proximity data to contactDistance with compat layer * Modify SOFA scenes * Change methods names * Add compat layer * Modify description commit cd00e5e9666f0f201ee81a5bb781a33c7690127b Author: Alex Bilger Date: Thu Jul 3 05:30:45 2025 +0200 [Rendering3D] Minor cleaning of DataDisplay (#5586) commit b67a93946417cf21e1fc04fe0fa5c2631ebb567d Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Wed Jul 2 19:23:12 2025 -0400 [SlidingLagrangianConstraint] Fix SlidingLagrangianConstraint and make it compatible with Rigids (#5528) * Fix Sliding constraint and make it compatible with Rigids * Take comment into account * Add forgotten file diff * Apply suggestions from code review Co-authored-by: Hugo --------- Co-authored-by: Hugo commit f37305c1672f69efc986f279802fdbf0c4ad7faa Author: Hugo Date: Mon Jun 30 01:57:22 2025 +0200 [GitHub] Add dependabot for monthly update of github-actions (#5552) commit 83276a98be498edc3cac390b860f5e3095f47ae0 Author: Frederick Roy Date: Thu Jun 26 22:07:06 2025 +0900 [Lagrangian.Model] BilateralLagrangianConstraint: enforce disabled state in getConstraintResolution (#5564) enforce disabled state in getConstraintResolution commit 8a65ebcd8ababcc432f08fe4dae46a7ff670a77d Author: Frederick Roy Date: Wed Jun 25 20:29:31 2025 +0900 [Visual] Add a new component drawing an AABB (#5527) * add new component drawing a AABB * Update Sofa/Component/Visual/src/sofa/component/visual/VisualBoundingBox.cpp (not necessary to add draw state) Co-authored-by: Alex Bilger * set template method pattern function private --------- Co-authored-by: Alex Bilger commit ad7495392dd348230b863cc7c84a83f874425db7 Author: Alex Bilger Date: Wed Jun 25 00:32:45 2025 +0200 [FEM.Elastic] Use triangle area function (#5555) commit 3f405d5ed04ba274ff85d558b8bd0bcdbf75caa8 Author: Alex Bilger Date: Tue Jun 24 02:13:33 2025 +0200 [Elastic] Generalize the use of Tetrahedron::volume (#5532) * [Elastic] Generalize the use of Tetrahedron::volume * add constexpr qualifier for Vec3r1 ctor * fix unit test * typo --------- Co-authored-by: Frederick Roy Co-authored-by: Frederick Roy commit 471cd37060a32ddaa0fbfe6b24427986e6b8c26c Author: Alex Bilger Date: Mon Jun 23 19:30:07 2025 +0200 [CMake] Add SofaSphFluid.CUDA to the presets (#5494) Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Co-authored-by: Hugo commit 7d27934f294758d9a0f00ad92895d3b7c7b69d34 Author: Frederick Roy Date: Mon Jun 23 21:31:07 2025 +0900 [Visual] VisualStyle: Set flags at init() (#5530) set flags at init() Co-authored-by: Hugo commit f1b2981a8df5b08c2c97740629cb7bb6cf21428a Author: Alex Bilger Date: Mon Jun 23 13:44:51 2025 +0200 [CMake] Add BeamAdapter.CUDA to the presets (#5491) Co-authored-by: Hugo commit 1ec80df821fd9ecab5a8290b60f2e0b2c2c0015e Author: Alex Bilger Date: Mon Jun 23 13:42:12 2025 +0200 [CMake] Add SofaDistanceGrid.CUDA to the presets (#5493) commit 56fa3647baa629f171c0776d7e1c09d4d936b223 Author: Alex Bilger Date: Mon Jun 23 08:28:43 2025 +0200 [CMake] Add SoftRobots.CUDA to the presets (#5492) commit db9c7bcd1445e36becfe5ea4782825bbc1302c75 Author: Alex Bilger Date: Mon Jun 23 00:35:07 2025 +0200 [FEM.Elastic] Avoid copy when reading rest position (#5544) commit b6aeee70426e6d9b042c8326e29c35e8d9dc4c06 Author: Alex Bilger Date: Fri Jun 20 10:15:30 2025 +0200 [SofaMatrix] Introduce widget to visualize a matrix in the GUI using imgui (#5512) * Move image components from Qt extension * remove registration in Qt * add registration * create plugin for imgui * add dependencies * add headers * implement the widget commit 6b913c64adf094bd9c996505fdc08732592cfdc8 Author: Olivier Roussel Date: Thu Jun 12 16:13:35 2025 +0200 [CImg] Fix CImg compat (#5526) * fix cimg cmake module to make it compatible with conda package * fix cimg compat for >=v3.5.0 commit c5ce643c34462f8161954a6a14bed343c667d2d9 Author: Alex Bilger Date: Thu Jun 12 09:16:42 2025 +0200 [Type] Remove the namespace on sqrt (#5531) commit 0cd2473c4816364652d8bc01ed983ed64cea73c9 Author: Frederick Roy Date: Thu Jun 12 09:14:18 2025 +0200 [Collision.Response.Mapper] Remove special characters for generated components' name (#5533) remove special characters commit 0fb23cbf56183ff5b1d06608bc5a11cc45b4836e Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Tue Jun 10 10:14:59 2025 +0200 [CMake] Add flag to enable the use of a local directory for external projects (#5511) Add flag to enable the use of a local directory for external projects instead of fetching them commit 21b7a67c7198a5cde725a82e8da0b23556222f5a Author: Alex Bilger Date: Wed Jun 4 21:42:17 2025 +0200 [Sofa.GL] Implement missing overload (#5522) Co-authored-by: Hugo commit 99ecb16709ba7eabb8ba9bf32fc1c087638f758b Author: courtecuisse Date: Wed Jun 4 14:35:51 2025 +0200 [SofaCUDA] Fix warning in SofaCUDA (#5520) Fix compilation of cuda-dependent plugins. Remove the NVCCFlag file in cuda-cmake.in as it xas suppress in previous commit. Also fix warning overflow in vector_device (change int to unsigned) Co-authored-by: Frederick Roy commit 401fe7fa98eb986256897684d1495523aa142ad4 Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Wed Jun 4 10:19:04 2025 +0200 [SofaCUDA] Fix OOT compilation of plugin depending on SofaCUDA (#5517) * Apply changes to the config file * Update applications/plugins/SofaCUDA/SofaCUDAConfig.cmake.in Co-authored-by: Alex Bilger * Add suggestion from Fred --------- Co-authored-by: Alex Bilger commit 11054c37c0602145d45371cc22650d29ef78c9f4 Author: Frederick Roy Date: Wed Jun 4 09:59:48 2025 +0200 [Collision.Geometry] Contribute to the BoundingBox only if drawn (#5508) contribute to the bbox only if is drawn (when onlyvisible=true) Co-authored-by: Hugo commit 282d423992d26422ac180024edbc8e0f825b5b7a Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Tue Jun 3 10:47:27 2025 +0200 [SofaCUDA] Reorder inclusion of SofaCUDA plugin and fix name of Sofa.Qt target (#5509) * Reoder inclusion of SofaCUDA plugin and fix name of Sofa.Qt target * Fix includes and namespaces * Fix missing --------- Co-authored-by: Hugo commit 1a38648d0dd1c3e41f458fb9b49688fe23c116bf Author: Alex Bilger Date: Mon Jun 2 16:57:43 2025 +0200 [Constraint] replace bwdInit by init (#5504) Co-authored-by: Hugo commit 4715cd1058e3781f5a62b37398c6fa790419fa8e Author: Alex Bilger Date: Mon Jun 2 09:24:43 2025 +0200 [Core] The Jacobian matrix of the constraints must be evaluated at the previous state (#5506) Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> commit 141a82ee1370238b2d9b6ec2d00e33b3acf870b1 Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Mon Jun 2 09:22:53 2025 +0200 [Lagrangian] Remove multigrid support in LCPConstraintSolver (#5372) * Remove unused, unstable and hevy multigrid support * Remove not wanted diff * Try to fix strange diff * Fix disapeared diff * Fix unit tests failing * Add compat layer * Complete ompat layer * restore initial changes * computeHierarchy was doing a necessary cleaning that wasn't related to the hierarchy * DEPRECATE instead of DISABLE getInfo --------- Co-authored-by: Alex Bilger Co-authored-by: Frederick Roy Co-authored-by: Hugo commit 8949253d66359a6c897ebd858ba00ca56346f02f Author: Alex Bilger Date: Wed May 28 21:57:53 2025 +0200 [Core] Deprecate unused method rebuildSystem (#5505) * [Core] Deprecate unused method rebuildSystem * deprecation instead of disabling Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> --------- Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Co-authored-by: Hugo commit 21d60551d0e4cf3b022ee3847b532bbdaccdfca8 Author: Alex Bilger Date: Wed May 28 21:47:34 2025 +0200 [Core] Remove not relevant comment (#5487) * [Core] Unvirtualize drawVisual * Restore virtual final Co-authored-by: Hugo * remove ; --------- Co-authored-by: Hugo commit e0e6b51cf9918ff0bf79a9439e41410b3df0e3d1 Author: Alex Bilger Date: Wed May 28 20:23:52 2025 +0200 [Lagrangian.Model] Redundant reading of free position (#5507) * [Lagrangian.Model] Redundant reading of free position * remove SOFA_UNUSED Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> --------- Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Co-authored-by: Hugo commit 39777bd945534b239a07156d8ac2402c1aa13089 Author: Alex Bilger Date: Wed May 28 19:15:49 2025 +0200 [Constraint] Introduce correctionFactor function for factorization (#5503) Co-authored-by: Hugo commit c311051cc6dd0cc170b3ce0082c2da21a8d82229 Author: Alex Bilger Date: Wed May 28 19:14:30 2025 +0200 [Core] Apply template method design pattern to CollisionModel::draw (#5490) * [Core] Apply template method design pattern to CollisionModel::draw * adapt CudaPointCollisionModel * change logic to visualize bounding hierarchy even if collision models are hidden * adapt CudaRigidDistanceGridCollisionModel * simplification --------- Co-authored-by: Hugo commit 6d6f12c0b94cac191ec466006c860ce0710c700e Author: Frederick Roy Date: Thu May 29 02:10:41 2025 +0900 [SofaCUDA] Modernize cmake (#5480) * remove find_package(SofaCUDA), move files for a more consistent structure, etc * add archs * add required(?) cudatoolkit and link cuda_runtime (for TLED) * restore cmake min version to 3.22 and add test for native feature * correct value for __cplusplus with msvc * set VolumetricRendering.CUDA as cuda project * debug: force 75 as arch * update distancegrid.cuda * add win32 definition * Revert "debug: force 75 as arch" This reverts commit 7a05f49fd52f6a44b305d7318e75d253dcd1a7f8. * use deprecated CUDA_ARCH_LIST variable if set (and warn) * fix cmake command * remove now useless SofaCUDANvccFlags file commit 3db7d742672c8bc7d1925eacf3b8e6f0505312f6 Author: Alex Bilger Date: Tue May 27 17:37:30 2025 +0200 [Core,Lagrangian] Add some useful comments (#5500) * [Core,Lagrangian] Add some useful comments * more comments --------- Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> commit ed3c534d30e7ee79dab76c11e05c91100683376e Author: Alex Bilger Date: Tue May 27 17:34:37 2025 +0200 [Core] Replace raw pointer by SingleStateAccessor (#5499) Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> commit f95579b76a0298e01844fa734e56620932a3b94c Author: Frederick Roy Date: Wed May 28 00:33:39 2025 +0900 [Type] Mat: Fix unsafe methods (constructor and assignement) from ptr (#5427) * rewrite methods from ptr * split tests and remove warnings --------- Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> commit 4acaf0f436ca5c65afd91a9c4c470499e37833b6 Author: Alex Bilger Date: Tue May 27 01:08:44 2025 +0200 [Core] Simplify constraint force computation (#5498) * [Core] Simplify constraint force computation * restore previous resize because of SofaCUDA * another simplification of a projection * don't repeat commit 6c98561ebb24a07969ac077732dcb728c1bf0675 Author: Alex Bilger Date: Thu May 22 03:36:21 2025 +0200 [Core] Rename Constraint to LagrangianConstraint (#5472) * rename files * compatibility for files * Rename class * Apply renaming * replace includes commit df96d0b435b0244a7aacde4a939d142cbc6353ee Author: Alex Bilger Date: Wed May 21 02:44:54 2025 +0200 [SofaCUDA] Remove code related to SPH (#5458) commit 4244202053b6595c16f639a95f7878ac05a41560 Author: Hugo Date: Tue May 20 06:24:59 2025 +0200 [VolumetricRendering] Apply new factory registration mechanism (#5406) * [VolumetricRendering] Apply new factory registration mechanism * fix warning * make CUDA extension in the same namspace (volumetricrendering) * fix wrongly replaced gpu::cuda::CudaVector * fix invalid change * forgot registerObjects function extern declaration * restore cuda namespace --------- Co-authored-by: Alex Bilger commit f05182c5f675d23798449b19cdb0fc7cfe59cdf3 Author: Alex Bilger Date: Tue May 20 01:06:11 2025 +0200 [Simulation.Core] Deprecate AnimateVisitor (#5497) * remove includes * deprecate AnimateVisitor commit 766560e87f8171ab79e1b40ac75c781e2f853965 Author: Themis Skamagkis <70031729+th-skam@users.noreply.github.com> Date: Mon May 19 01:51:07 2025 +0200 [SofaDistanceGrid] Substitute pointer-sharing and ref-counting mechanism of the DistanceGrid class with std smart pointers (#5426) * [SofaDistanceGrid] Add smart pointers to DistanceGrid objects - less manual memory management * [SofaDistanceGrid] Substitute shared with weak ptr to the static key-value pair in DistanceGrid The weak ptr replicates the previous behavior: the ptr in the static map does not increase counts in the ref block --------- Co-authored-by: Themis Skamagkis commit 8c1314e311f696f787bb3c5a5e3e9dae25fb8a87 Author: Alex Bilger Date: Mon May 19 01:24:46 2025 +0200 [Core] Update comment to reflect code (#5495) commit 99e29b777860e01501632efb5c9af641f4352e1a Author: Themis Skamagkis <70031729+th-skam@users.noreply.github.com> Date: Fri May 16 14:30:14 2025 +0200 [SOFADistanceGrid] Replace pointer to the mstate with a link in the collision models of the plugin (#5425) * [SofaDistanceGrid] Swaped pointer to MechanicalState with a Link within the node of the collision model * [SofaDistanceGrid] Removed the ffdRGrid & ffdSGrid pointers from the FFDDistanceGridCollisionModel class * Their scope is restricted within the init function - they should only be defined inside the function. * [SofaDistanceGrid] Pointer to BaseMeshTopology swaped for a Link in FFDDistanceGridCollisionModel * [SofaDistanceGrid] Use of the SingleStateAccessor to create a link with the MechanicalState for the collision models of the plugin --------- Co-authored-by: Themis Skamagkis commit 4967bb465e41a91437aa68b7c0347dff4765e72b Author: Hugo Date: Fri May 16 04:13:46 2025 +0200 [ODESolver] Fix warnings in StaticSolver (#5488) commit 6fa5ac47bb32f4f3a1ea671bbfaeeb6f1557c1a6 Author: Hugo Date: Fri May 16 04:11:19 2025 +0200 [Core] Remove useless inheritance in BaseInteractionProjectiveCS (#5479) [Core] Remove useless inheritance in BaseInteractionProjectiveConstraintSet BaseInteractionProjectiveConstraintSet inherits from BaseProjectiveConstraintSet which already inherits from StateAccessor commit dfd269f08225881f1c1dbee0740920013d1f4acc Author: Themis Skamagkis <70031729+th-skam@users.noreply.github.com> Date: Thu May 15 22:04:01 2025 +0200 [SofaDistanceGrid] New scenes and regression tests for the plugin (#5411) * [SofaDistanceGrid] Duplicated example scenes to demonstrate their use with the FreeMotionAnimationLoop * Some updates in the old scenes as well * [SofaDistanceGrid] Added a new example scene for the RigidDistanceGridCollisionModel * It uses the FreeMotionAnimationLoop * Updated scene names in CMakeLists * [SofaDistanceGrid] Updated .regression-tests for the plugin scenes * Possible removal for windows_vs2022_options check with timeout errors for 15 scenes ? --------- Co-authored-by: Themis Skamagkis commit 000f9fe98e2d780c513177ecc4867f1119194d69 Author: Alex Bilger Date: Thu May 15 02:57:47 2025 +0200 [Topology.Container.Dynamic] Missing call to super init (#5431) * [Topology.Container.Dynamic] Missing call to super init * Fix reload of the mesh file because of src="@" commit f74321644d9ad7ed95ba0f3a008fc28d38111b09 Author: Alex Bilger Date: Thu May 15 00:55:57 2025 +0200 [Core] Update deprecation date (#5469) commit 7cc7f6c5fa805ac37711356b18148a2e0761e96d Author: Hugo Date: Wed May 14 06:05:05 2025 +0200 [IO.Mesh] Add check on VTK format version (#5438) * [IO.Mesh] Add check on VTK format version * Update Sofa/Component/IO/Mesh/src/sofa/component/io/mesh/MeshVTKLoader.cpp Co-authored-by: Alex Bilger --------- Co-authored-by: Frederick Roy Co-authored-by: Alex Bilger commit 09310db49241973ae4e1acec57ea9c7fa1947a13 Author: Hugo Date: Wed May 14 03:52:27 2025 +0200 [Core] isComponentStateInvalid function (#5440) commit af79e47404aab1df7af5f636bcca570ae8f6b957 Author: Alex Bilger Date: Tue May 13 10:05:33 2025 +0200 [Core] Rename BaseConstraint to BaseLagrangianConstraint (#5423) * [Core] Rename BaseConstraint to BaseLagrangianConstraint * restore toBaseConstraint and deprecate it * fix? --------- Co-authored-by: Hugo commit fe008edf459167c4a71c102c6786e6d18ea84625 Author: Alex Bilger Date: Tue May 13 00:57:06 2025 +0200 [Engine.Select] Automatically find topology in MeshBoundaryROI (#5116) * [Engine.Select] Automatically find topology in MeshBoundaryROI * add warning when no topology is provided commit 9323eaa7f7b06a45894820eb9c8b1c121518f565 Author: Alex Bilger Date: Thu May 8 02:07:06 2025 +0200 [LinearSolver] Fix usage of a wrong pointer (#5430) commit 41876e7ee2c91a0ca346db2301c7553afbfaf439 Author: Alex Bilger Date: Wed Apr 30 10:37:25 2025 +0200 [SofaImplicitField] A bit of cleaning in the plugin (#5419) * Introduced `MODULE_NAME` and `MODULE_VERSION` as constants in the configuration for maintainability * remove useless readme file * remove dependency to SofaDistanceGrid * Remove definition Co-authored-by: Frederick Roy --------- Co-authored-by: Hugo Co-authored-by: Frederick Roy commit 6d5559d940ddf3a5613ab6450b407079ad66d5a7 Author: Hugo Date: Wed Apr 30 07:30:33 2025 +0200 [ArticulatedSystemPlugin] Apply new factory registration mechanism (#5394) * [ArticulatedSystemPlugin] Apply new factory registration mechanism * update namespace commit b1ceb29ae85e25d12d01266a7a69e4dfff578867 Author: Hugo Date: Wed Apr 30 07:29:07 2025 +0200 [SofaImplicitField] Apply new factory registration mechanism (#5392) * [SofaImplicitField] Apply new factory registration mechanism * remove getModuleComponentList * fix typo in namespace * forgotten typo commit 4156b8be64f6a5534e4d01d7b64644362becf9cc Author: Hugo Date: Wed Apr 30 07:27:28 2025 +0200 [SofaDistanceGrid] Apply new factory registration mechanism (#5391) * [SofaDistanceGrid] Apply new factory registration mechanism * remove getModuleComponentList * Correctly sort registration in folder-appropriate init.cpp * fix init.cpp in cuda extension * Apply suggestions from code review * Update DistanceGridCollisionModel.cpp * fix typo in registerObjects --------- Co-authored-by: Frederick Roy commit f8fb655aebc38238fcf68c110c58b2ddc114a8ed Author: Hugo Date: Mon Apr 28 01:13:42 2025 +0200 [CollisionOBBCapsule] Apply new factory registration mechanism (#5404) * [CollisionOBBCapsule] Apply new factory registration mechanism * Fix test commit 590b9f7ae01b730c7f1b316d00da48f1d8f86d16 Author: EulalieCoevoet Date: Thu Apr 24 03:20:46 2025 +0200 [runSofa,Helper] Changes screenshots and config directories location (#5096) * [main] changes screenshots and config directories location * [helper] Utils: on Windows, check env to get user home directory * [Helper] fixes getUserHomeDirectory for Windows * Update Utils.cpp (bogus bracket) * Apply suggestions from code review Use of FileSystem::append Co-authored-by: Alex Bilger * [runSofa,Helper] adds test for getUserHomeDirectory and getSofaDataDirectory * [helper/test] attempt to fix test on Windows * test * [helper/test] attempt to fix test on Windows * [helper] replaces findOrCreateAValidPath by ensureFolderExists * [helper] removes test * fix user home for macOS * test using fs::exists * use only std::fs in main --------- Co-authored-by: Frederick Roy Co-authored-by: Hugo Co-authored-by: Alex Bilger Co-authored-by: Frederick Roy commit a85c8b8275bf895e5fc3101ca916e7726dbac67d Author: Alex Bilger Date: Thu Apr 24 00:17:18 2025 +0200 [Lagrangian.Model] Remove extra endEdit (#5421) commit 74ab93433e1935759053c247fa85cc8fb90184bd Author: Alex Bilger Date: Thu Apr 24 00:16:06 2025 +0200 [examples] Run PluginFinder (#5415) run PluginFinder commit 960bfc2e249da32a65433de079800592ab2ae9bb Author: Alex Bilger Date: Wed Apr 23 02:45:29 2025 +0200 [examples] remove non-existing plugin (#5417) remove non-existing plugin commit c0f83483b4520ba7a5cd7d4c4338d2dd0ce4a214 Author: Alex Bilger Date: Wed Apr 23 02:22:59 2025 +0200 [examples] Remove scenes with SleepController (#5416) Remove scenes with SleepController commit ef80a04ce89e2873d27b4558929afe60abfb5ab8 Author: Alex Bilger Date: Wed Apr 23 01:33:08 2025 +0200 [Examples] Remove examples using Monitor (#5418) Remove examples using Monitor * Add action to reboot slaves (#36) * Fix rteboot action name * Fix reboot action * FIX log naming strategy (#34) * Add matrix os into log name * try fix naming * Squashed commit of the following: commit 92b18e41575d41846091931a1a5cc203742be650 Author: Paul Baksic Date: Fri Sep 26 15:22:41 2025 +0200 Fix reboot action commit 0bd8ae0875ce0742ae1f85c3d6c2c4c8093ec9d3 Author: Paul Baksic Date: Fri Sep 26 15:20:40 2025 +0200 Fix rteboot action name commit 4a3b7cf6044a0a32275241d181eb0100b8f03cb8 Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Fri Sep 26 15:18:04 2025 +0200 Add action to reboot slaves (#36) commit f84eaaf0b7b1c90ef6a24649259c9769c7ffa9a4 Merge: 21993a7629 5007b6dc27 Author: Paul Baksic <30337881+bakpaul@users.noreply.github.com> Date: Wed Sep 24 15:07:45 2025 +0200 Merge branch 'sofa-framework:master' into master commit 21993a76292ab5a36db44047fc0cd02d4c0970d9 Author: Paul Baksic Date: Wed Sep 24 15:06:22 2025 +0200 Squashed commit of the following: commit 5007b6dc27661cddbcb3becee9de3874f9ab8180 Author: Frederick Roy Date: Wed Sep 24 21:37:23 2025 +0900 [Examples] Fix MultiStepAnimationLoop scene (#5700) make the multistepanimationloop scene work again Co-authored-by: Paul Baksic <30337881+bakpaul@users.noreply.github.com> commit b0886d2087687f3dd1829a2a740e03e129c07689 Author: Frederick Roy Date: Wed Sep 24 21:36:22 2025 +0900 [all] Matrix: replace all calls to [i][j] with a single call (i,j) (#5650) * replace in animation loop * replace in collision * replace in constraint * debug: add assertion ;; replace in type * replace in helper * replace in linearalgebra * replace in defaulttype * replace in core * compile AnimationLoop * compile Mapping * compile LinearSolver * compile FEM.HyperE * compile FEM.Elastic * compile FEM.NonUni * compile Spring * compile MechaLoad * compile Engine * compile Collision * compile MT * compile full Mat * compile gl * restore operator [] * restore [] for lines * Update Sofa/Component/Mapping/Linear/src/sofa/component/mapping/linear/BarycentricMappers/BarycentricMapperMeshTopology.inl Co-authored-by: Themis Skamagkis <70031729+th-sk…

Create mechanism to be able to warn third party library that the simulation reached a crashed #9

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