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Hi developer,
I am using Seurat V5, and from below block
`data_S <- GeneTrajectory::RunDM(data_S)
Calculate cell-cell graph distances over a cell-cell kNN graph
cell.graph.dist <- GetGraphDistance(data_S, K = 10)
Coarse-grain the cell graph by grouping cells into N=500 "meta-cells"
cg_output <- CoarseGrain(data_S, cell.graph.dist, genes, N = 500)
`
This problem seems to occur from the highly different structure of the V5 object. Would there be updates regarding this?
Seurat has already changed to V5 and trying to stick with it, updates would be highly valuable for future use!
Thank you :)
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