From b1237b3cbb40bfa65b5af4f716979692ede54c49 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 09:26:11 -0600 Subject: [PATCH 01/17] remove space --- docs/portal.md | 1 - 1 file changed, 1 deletion(-) diff --git a/docs/portal.md b/docs/portal.md index 770fd70d..317244d4 100644 --- a/docs/portal.md +++ b/docs/portal.md @@ -115,4 +115,3 @@ run modules and code with the Slurm scheduler from an SSH session. selecting the "Upload" button. - You can download files and directories by selecting them and then selecting the "Download" button. - From e0e2bdb71c310ecb7ebdf952d285aba214fc4f39 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 09:40:17 -0600 Subject: [PATCH 02/17] add return --- docs/index.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/index.md b/docs/index.md index 8a90b99d..db549a42 100644 --- a/docs/index.md +++ b/docs/index.md @@ -22,4 +22,4 @@ the advanced compute capabilities provided with the cluster. Students, faculty, or staff should register for the workshops in advance via the links below. Please bring your laptop to the workshop. - \ No newline at end of file + From 8a3eb810e3aaee07f00b3f264acbcadfe69e80c9 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:18:43 -0600 Subject: [PATCH 03/17] touch module file to triger CI for test --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index 3884eeef..d8ad032a 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -12,6 +12,7 @@ R -- launches an R terminal Rscript script -- run a script ]]) + whatis("Name: Biostats R") whatis("Version: ml-verse:4.4.1") whatis("Category: R") From 1ad66c9cdfd497fb198db636816ae39b5449b741 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:20:37 -0600 Subject: [PATCH 04/17] touch to test ci --- modules/testing/biostats_r/1.0.0.lua | 1 - 1 file changed, 1 deletion(-) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index d8ad032a..bfade169 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -22,7 +22,6 @@ family("R") extensions("DEMORT, stacks/2.68, freebayes, trimmonatic/0.39, bwa/0.7.18, pear/0.9.11, fastp/0.24.0, dDocent/2.9.8, fastx-toolkit, fastqc, bowtie2, htseq, star/2.7.11b, sra-tools/3.2.0") - always_load('apptainer') local sif_file = '/hpc/m3/containers/biostats_r/biostats_r_1.0.0.sif' From 8b0dea5a668c23d4893ac0e0d83dc3ed2d3312d3 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:24:52 -0600 Subject: [PATCH 05/17] touch to trigger ci --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index bfade169..2a9a2ff1 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -40,6 +40,7 @@ local csh_cmd = cmd .. csh_ending set_shell_function(app, sh_cmd, csh_cmd) end + setenv('CONTAINER_RSESSION', '/usr/lib/rstudio-server/bin/rsession') setenv('CONTAINER_RSERVER', '/usr/lib/rstudio-server/bin/rserver') setenv('CONTAINER_R', '/usr/local/bin/R') From f69968e00ea9dfd3bb8338fe27fa746c90ac90e6 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:28:06 -0600 Subject: [PATCH 06/17] touch to trigger ci --- modules/testing/biostats_r/1.0.0.lua | 1 - 1 file changed, 1 deletion(-) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index 2a9a2ff1..bfade169 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -40,7 +40,6 @@ local csh_cmd = cmd .. csh_ending set_shell_function(app, sh_cmd, csh_cmd) end - setenv('CONTAINER_RSESSION', '/usr/lib/rstudio-server/bin/rsession') setenv('CONTAINER_RSERVER', '/usr/lib/rstudio-server/bin/rserver') setenv('CONTAINER_R', '/usr/local/bin/R') From afa632b211c7a8dd54ab5203eb7e82dde5f519fd Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:36:00 -0600 Subject: [PATCH 07/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index bfade169..d8ad032a 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -22,6 +22,7 @@ family("R") extensions("DEMORT, stacks/2.68, freebayes, trimmonatic/0.39, bwa/0.7.18, pear/0.9.11, fastp/0.24.0, dDocent/2.9.8, fastx-toolkit, fastqc, bowtie2, htseq, star/2.7.11b, sra-tools/3.2.0") + always_load('apptainer') local sif_file = '/hpc/m3/containers/biostats_r/biostats_r_1.0.0.sif' From bde1e2cbf9fde9b68672829cdee3d775d8bd852b Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:44:27 -0600 Subject: [PATCH 08/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 2 -- 1 file changed, 2 deletions(-) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index d8ad032a..fa6aa5c8 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -12,7 +12,6 @@ R -- launches an R terminal Rscript script -- run a script ]]) - whatis("Name: Biostats R") whatis("Version: ml-verse:4.4.1") whatis("Category: R") @@ -22,7 +21,6 @@ family("R") extensions("DEMORT, stacks/2.68, freebayes, trimmonatic/0.39, bwa/0.7.18, pear/0.9.11, fastp/0.24.0, dDocent/2.9.8, fastx-toolkit, fastqc, bowtie2, htseq, star/2.7.11b, sra-tools/3.2.0") - always_load('apptainer') local sif_file = '/hpc/m3/containers/biostats_r/biostats_r_1.0.0.sif' From 0c3ca03c639ab5a2c6df5084baa20cbdc1e4c8bb Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:48:11 -0600 Subject: [PATCH 09/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index fa6aa5c8..bfade169 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -12,6 +12,7 @@ R -- launches an R terminal Rscript script -- run a script ]]) + whatis("Name: Biostats R") whatis("Version: ml-verse:4.4.1") whatis("Category: R") From f0d8249a6f339a69e161107cf70b0f3d85f83071 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 10:54:34 -0600 Subject: [PATCH 10/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index bfade169..2a9a2ff1 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -40,6 +40,7 @@ local csh_cmd = cmd .. csh_ending set_shell_function(app, sh_cmd, csh_cmd) end + setenv('CONTAINER_RSESSION', '/usr/lib/rstudio-server/bin/rsession') setenv('CONTAINER_RSERVER', '/usr/lib/rstudio-server/bin/rserver') setenv('CONTAINER_R', '/usr/local/bin/R') From aa49eee5ea964cb6d05da7af9525629c781d6f3d Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 11:28:44 -0600 Subject: [PATCH 11/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 - 1 file changed, 1 deletion(-) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index 2a9a2ff1..bfade169 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -40,7 +40,6 @@ local csh_cmd = cmd .. csh_ending set_shell_function(app, sh_cmd, csh_cmd) end - setenv('CONTAINER_RSESSION', '/usr/lib/rstudio-server/bin/rsession') setenv('CONTAINER_RSERVER', '/usr/lib/rstudio-server/bin/rserver') setenv('CONTAINER_R', '/usr/local/bin/R') From 16c948cfecd0a15554d13afcf16cc22004f138a2 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 11:33:37 -0600 Subject: [PATCH 12/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 - 1 file changed, 1 deletion(-) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index bfade169..fa6aa5c8 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -12,7 +12,6 @@ R -- launches an R terminal Rscript script -- run a script ]]) - whatis("Name: Biostats R") whatis("Version: ml-verse:4.4.1") whatis("Category: R") From 40289b2015981aca95dcbe5460d222d53a109c26 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 11:39:39 -0600 Subject: [PATCH 13/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index fa6aa5c8..bfade169 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -12,6 +12,7 @@ R -- launches an R terminal Rscript script -- run a script ]]) + whatis("Name: Biostats R") whatis("Version: ml-verse:4.4.1") whatis("Category: R") From 25ec0fcc231c9c80190871c00284b6a62119f9a8 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 11:57:14 -0600 Subject: [PATCH 14/17] change lmoderror to lmodbreak --- modules/m3/applications/crystal/23/1.0.1-1.lua | 2 +- modules/m3/applications/crystal/23/1.0.1.lua | 2 +- modules/m3/applications/gaussian/g09d.lua | 2 +- modules/m3/applications/gaussian/g16c/haswell.lua | 2 +- modules/m3/applications/gaussian/g16c/zen3.lua | 2 +- modules/m3/applications/gaussview/6.0.16.lua | 2 +- modules/m3/applications/vasp/5.4.4.lua | 2 +- modules/mp/apps/gaussian/g16c02.lua | 2 +- 8 files changed, 8 insertions(+), 8 deletions(-) diff --git a/modules/m3/applications/crystal/23/1.0.1-1.lua b/modules/m3/applications/crystal/23/1.0.1-1.lua index 3d509c9d..085de8c0 100644 --- a/modules/m3/applications/crystal/23/1.0.1-1.lua +++ b/modules/m3/applications/crystal/23/1.0.1-1.lua @@ -7,7 +7,7 @@ local found = required_group("crystal") local found_new = required_group("hpc-crystal") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("crystal") diff --git a/modules/m3/applications/crystal/23/1.0.1.lua b/modules/m3/applications/crystal/23/1.0.1.lua index 9fbce199..36a43061 100644 --- a/modules/m3/applications/crystal/23/1.0.1.lua +++ b/modules/m3/applications/crystal/23/1.0.1.lua @@ -7,7 +7,7 @@ local found = required_group("crystal") local found_new = required_group("hpc-crystal") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("crystal") diff --git a/modules/m3/applications/gaussian/g09d.lua b/modules/m3/applications/gaussian/g09d.lua index da6ee68a..4435ae2d 100644 --- a/modules/m3/applications/gaussian/g09d.lua +++ b/modules/m3/applications/gaussian/g09d.lua @@ -7,7 +7,7 @@ local found = required_group("gaussian") local found_new = required_group("hpc-gaussian") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("gaussian") diff --git a/modules/m3/applications/gaussian/g16c/haswell.lua b/modules/m3/applications/gaussian/g16c/haswell.lua index 13912fc6..6f58d096 100644 --- a/modules/m3/applications/gaussian/g16c/haswell.lua +++ b/modules/m3/applications/gaussian/g16c/haswell.lua @@ -7,7 +7,7 @@ local found = required_group("gaussian") local found_new = required_group("hpc-gaussian") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("gaussian") diff --git a/modules/m3/applications/gaussian/g16c/zen3.lua b/modules/m3/applications/gaussian/g16c/zen3.lua index 455632ba..af8df5de 100644 --- a/modules/m3/applications/gaussian/g16c/zen3.lua +++ b/modules/m3/applications/gaussian/g16c/zen3.lua @@ -7,7 +7,7 @@ local found = required_group("gaussian") local found_new = required_group("hpc-gaussian") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("gaussian") diff --git a/modules/m3/applications/gaussview/6.0.16.lua b/modules/m3/applications/gaussview/6.0.16.lua index 1fedbc6c..d7aae03e 100644 --- a/modules/m3/applications/gaussview/6.0.16.lua +++ b/modules/m3/applications/gaussview/6.0.16.lua @@ -6,7 +6,7 @@ local found = required_group("gaussian") local found_new = required_group("hpc-gaussian") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("gaussview") diff --git a/modules/m3/applications/vasp/5.4.4.lua b/modules/m3/applications/vasp/5.4.4.lua index 644f5b0c..e9ba9c38 100644 --- a/modules/m3/applications/vasp/5.4.4.lua +++ b/modules/m3/applications/vasp/5.4.4.lua @@ -7,7 +7,7 @@ local found = required_group("vasp") local found_new = required_group("hpc-vasp") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("vasp") diff --git a/modules/mp/apps/gaussian/g16c02.lua b/modules/mp/apps/gaussian/g16c02.lua index fe1768a2..1ee3f00a 100644 --- a/modules/mp/apps/gaussian/g16c02.lua +++ b/modules/mp/apps/gaussian/g16c02.lua @@ -7,7 +7,7 @@ local found = required_group("gaussian") local found_new = required_group("hpc-gaussian") if (not found and not found_new) then - LmodError(err_message) + LmodBreak(err_message) end family("gaussian") From 7c233940e28430755767a9826d4acb5fc4a1f415 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 12:00:48 -0600 Subject: [PATCH 15/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index bfade169..a7f09590 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -49,3 +49,4 @@ unsetenv('XDG_RUNTIME_DIR') build_command('R') build_command('Rscript') + \ No newline at end of file From 1f0a729ae8db7bd7ca6d330140a6c7eb31419e0c Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 12:12:03 -0600 Subject: [PATCH 16/17] update modules to use "userinGRoups --- modules/m3/applications/crystal/23/1.0.1-1.lua | 5 ++--- modules/m3/applications/crystal/23/1.0.1.lua | 5 ++--- modules/m3/applications/gaussian/g09d.lua | 5 ++--- modules/m3/applications/gaussian/g16c/haswell.lua | 5 ++--- modules/m3/applications/gaussian/g16c/zen3.lua | 5 ++--- modules/m3/applications/gaussview/6.0.16.lua | 5 ++--- modules/m3/applications/vasp/5.4.4.lua | 5 ++--- modules/mp/apps/gaussian/g16c02.lua | 5 ++--- 8 files changed, 16 insertions(+), 24 deletions(-) diff --git a/modules/m3/applications/crystal/23/1.0.1-1.lua b/modules/m3/applications/crystal/23/1.0.1-1.lua index 085de8c0..8c69f21c 100644 --- a/modules/m3/applications/crystal/23/1.0.1-1.lua +++ b/modules/m3/applications/crystal/23/1.0.1-1.lua @@ -3,10 +3,9 @@ whatis("CRYSTAL 23 v1.0.1: Must be member of crystal group. Request access at vi local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join crystal group\n" -local found = required_group("crystal") -local found_new = required_group("hpc-crystal") +local valid_groups = userInGroups("hpc-crystal") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/m3/applications/crystal/23/1.0.1.lua b/modules/m3/applications/crystal/23/1.0.1.lua index 36a43061..79b9611f 100644 --- a/modules/m3/applications/crystal/23/1.0.1.lua +++ b/modules/m3/applications/crystal/23/1.0.1.lua @@ -3,10 +3,9 @@ whatis("CRYSTAL 23 v1.0.1: Must be member of crystal group. Request access at vi local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join crystal group\n" -local found = required_group("crystal") -local found_new = required_group("hpc-crystal") +local valid_groups = userInGroups("hpc-crystal") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/m3/applications/gaussian/g09d.lua b/modules/m3/applications/gaussian/g09d.lua index 4435ae2d..132927bd 100644 --- a/modules/m3/applications/gaussian/g09d.lua +++ b/modules/m3/applications/gaussian/g09d.lua @@ -3,10 +3,9 @@ whatis("Gaussian 09 D: Must be member of gaussian group. Request access at help@ local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join gaussian group\n" -local found = required_group("gaussian") -local found_new = required_group("hpc-gaussian") +local valid_groups = userInGroups("hpc-gaussian") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/m3/applications/gaussian/g16c/haswell.lua b/modules/m3/applications/gaussian/g16c/haswell.lua index 6f58d096..49fb5dad 100644 --- a/modules/m3/applications/gaussian/g16c/haswell.lua +++ b/modules/m3/applications/gaussian/g16c/haswell.lua @@ -3,10 +3,9 @@ whatis("Gaussian 16 C.02: Must be member of gaussian group. Request access at he local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join gaussian group\n" -local found = required_group("gaussian") -local found_new = required_group("hpc-gaussian") +local valid_groups = userInGroups("hpc-gaussian") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/m3/applications/gaussian/g16c/zen3.lua b/modules/m3/applications/gaussian/g16c/zen3.lua index af8df5de..a199ea76 100644 --- a/modules/m3/applications/gaussian/g16c/zen3.lua +++ b/modules/m3/applications/gaussian/g16c/zen3.lua @@ -3,10 +3,9 @@ whatis("Gaussian 16 C.02: Must be member of gaussian group. Request access at he local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join gaussian group\n" -local found = required_group("gaussian") -local found_new = required_group("hpc-gaussian") +local valid_groups = userInGroups("hpc-gaussian") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/m3/applications/gaussview/6.0.16.lua b/modules/m3/applications/gaussview/6.0.16.lua index d7aae03e..42eca1c3 100644 --- a/modules/m3/applications/gaussview/6.0.16.lua +++ b/modules/m3/applications/gaussview/6.0.16.lua @@ -2,10 +2,9 @@ whatis("GaussView") local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join gaussian group\n" -local found = required_group("gaussian") -local found_new = required_group("hpc-gaussian") +local valid_groups = userInGroups("hpc-gaussian") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/m3/applications/vasp/5.4.4.lua b/modules/m3/applications/vasp/5.4.4.lua index e9ba9c38..b94fee2a 100644 --- a/modules/m3/applications/vasp/5.4.4.lua +++ b/modules/m3/applications/vasp/5.4.4.lua @@ -3,10 +3,9 @@ whatis("VASP 5.4.4: Must be member of vasp group. Request access at via help@smu local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join vasp group\n" -local found = required_group("vasp") -local found_new = required_group("hpc-vasp") +local valid_groups = userInGroups("hpc-vasp") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end diff --git a/modules/mp/apps/gaussian/g16c02.lua b/modules/mp/apps/gaussian/g16c02.lua index 1ee3f00a..cf60415c 100644 --- a/modules/mp/apps/gaussian/g16c02.lua +++ b/modules/mp/apps/gaussian/g16c02.lua @@ -3,10 +3,9 @@ whatis("Gaussian 16 C.02: Must be member of gaussian group. Request access at he local err_message="To use this module you must be in a particular group\n" .. "Please contact help@smu.edu with HPC in the subject to join gaussian group\n" -local found = required_group("gaussian") -local found_new = required_group("hpc-gaussian") +local valid_groups = userInGroups("hpc-gaussian") -if (not found and not found_new) then +if (not valid_groups) then LmodBreak(err_message) end From 0d0a60269593e4e4a3f4bbaaebda4b822df83f39 Mon Sep 17 00:00:00 2001 From: John LaGrone Date: Thu, 13 Nov 2025 12:16:58 -0600 Subject: [PATCH 17/17] touch to trigger CI --- modules/testing/biostats_r/1.0.0.lua | 1 - 1 file changed, 1 deletion(-) diff --git a/modules/testing/biostats_r/1.0.0.lua b/modules/testing/biostats_r/1.0.0.lua index a7f09590..bfade169 100644 --- a/modules/testing/biostats_r/1.0.0.lua +++ b/modules/testing/biostats_r/1.0.0.lua @@ -49,4 +49,3 @@ unsetenv('XDG_RUNTIME_DIR') build_command('R') build_command('Rscript') - \ No newline at end of file