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Description
I am following the example code and have this issue.
triplet <- create_triplet_distance_based(
region = rownames(dna.met.chr21),
motif.search.window.size = 50,
motif.search.p.cutoff = 10^-3,
target.method = "genes.promoter.overlap",
genome = "hg19",
cores = 1
)
And the echo:
Finding target genes
Mapping regions to the closest gene
Looking for TFBS
adding rname 'https://testjaspar.uio.no/download/database/JASPAR2024.sqlite'
Error in bfcrpath(BiocFileCache(), url) :
not all 'rnames' found or unique.
In addition: Warning messages:
1: download failed
web resource path: ‘https://testjaspar.uio.no/download/database/JASPAR2024.sqlite’
local file path: ‘/home/ad/lxhome/l/luoxiao/Linux/.cache/R/BiocFileCache/524872a720bc_JASPAR2024.sqlite’
reason: SSL peer certificate or SSH remote key was not OK: [testjaspar.uio.no] SSL certificate problem: certificate has expired
2: bfcadd() failed; resource removed
rid: BFC8
fpath: ‘https://testjaspar.uio.no/download/database/JASPAR2024.sqlite’
reason: download failed
3: In value[[3L]](cond) :
trying to add rname 'https://testjaspar.uio.no/download/database/JASPAR2024.sqlite' produced error:
bfcadd() failed; see warnings()
Has anyone come across the same issue and found a solution?
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