[suggestion] Add support of process substitution or named pipe

[shenwei356]

Hi Bede, It would be nice if deacon could support process substitution (<( cmd ))or named pipe. So I can process sequence data from multiple lanes, which actually belong to the same sample.

deacon filter -o {}.target_1.fq.gz -O {}.target_2.fq.gz {dindex} <(zcat {}.*_1.fq.gz) <(zcat {}.*_2.fq.gz);

[bede]

Hi Wei,
Ah yes, I can see this would be useful, thanks for suggesting. I will see if I can implement it safely and get back to you.

Thanks,
Bede

[bede]

Thanks for testing Wei, merged pending release.