Warning message: package ‘DESeq’ is not available for Bioconductor version '3.14'

[LXsasse]

Hi,
It looks like Bioconductor got rid of DESeq. Is there a version of Rembrandts that uses DESeq2?
Unfortunately, changing the library from DESeq to DESeq2 doesn't just work because the function "newCountDataSetFromHTSeqCount" is not contained in DESeq2.

[rached-97]

Hi Alexander,

I modified the code some time ago to use DESeq2, I'll merge with the main branch shortly.

[LXsasse]

Thank you! That would be really helpful.

[rached-97]

The new code's been merged. Please give it a try.
Apologies for the delay.