Installation fails despite all dependencies are installed #10
Description
Which version was used?
This behavior can be repeated with either the release or the dev version.
Which R version and which OS was used?
platform x86_64-pc-linux-gnu
arch x86_64
os linux-gnu
system x86_64, linux-gnu
status
major 4
minor 1.2
year 2021
month 11
day 01
svn rev 81115
language R
version.string R version 4.1.2 (2021-11-01)
nickname Bird Hippie
What is the error message that appears?
Release and dev version fail with the same error :
Downloading GitHub repo daewoooo/StrandPhaseR@devel
── R CMD build ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file ‘/tmp/Rtmp2iinK2/remotes2c5de06d83bf8b/daewoooo-StrandPhaseR-9b56198/DESCRIPTION’ ...
─ preparing ‘StrandPhaseR’:
✔ checking DESCRIPTION meta-information ...
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ building ‘StrandPhaseR_0.99.tar.gz’
Installing package into ‘/home/nils/R/x86_64-pc-linux-gnu-library/4.1’
(as ‘lib’ is unspecified)
* installing *source* package ‘StrandPhaseR’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error: object ‘genotype.binom’ is not exported by 'namespace:breakpointR'
Execution halted
ERROR: lazy loading failed for package ‘StrandPhaseR’
* removing ‘/home/nils/R/x86_64-pc-linux-gnu-library/4.1/StrandPhaseR’
Warning message:
In i.p(...) :
installation of package ‘/tmp/Rtmp2iinK2/file2c5de025acc1d7/StrandPhaseR_0.99.tar.gz’ had non-zero exit status
This behaviour might be related to this issue https://github.com/HenrikBengtsson/R.utils/issues/29 but I'm not entirely sure.