From 90e233ef42dc3e35f6dd5aecbbabfc22a101aad7 Mon Sep 17 00:00:00 2001 From: Jim Johnson Date: Sat, 13 Feb 2021 10:34:30 -0600 Subject: [PATCH] Update README.md --- README.md | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/README.md b/README.md index 720ab96..0dbd98c 100644 --- a/README.md +++ b/README.md @@ -14,7 +14,7 @@ Quantitative analysis on the function and taxonomy of microbiomes and their inte - [Usage](#usage-) - [Tests](#tests-) -## Setup [⤴](#table-of-contents) +## Setup (#table-of-contents) ### BioConda @@ -28,10 +28,10 @@ conda config --add channels bioconda conda config --add channels conda-forge ``` -Then, run the following command to set up an environment named mqome, which will have metaQuantome (version 2.0.0) and all dependencies in it: +Then, run the following command to set up an environment named mqome, which will have metaQuantome (version 2.0.1) and all dependencies in it: ``` -conda create -n mqome metaquantome=2.0.0 +conda create -n mqome metaquantome=2.0.1 ``` If the following prompt is seen at the command line, type `y`: @@ -62,13 +62,13 @@ To install your local version of metaQuantome, run the following in the root dir pip install . ``` -## Usage [⤴](#table-of-contents) +## Usage (#table-of-contents) In-depth tutorials can be found [here](https://galaxyproteomics.github.io/metaquantome_mcp_analysis/) for the following: 1. [metaQuantome command-line interface](https://galaxyproteomics.github.io/metaquantome_mcp_analysis/cli_tutorial/cli_tutorial.html) 2. [metaQuantome Galaxy tool](https://galaxyproteomics.github.io/metaquantome_mcp_analysis/galaxy_tutorial/galaxy_tutorial.html) -## Tests [⤴](#table-of-contents) +## Tests (#table-of-contents) For testing, you will also need to set up a BioConda environment as specified [above](#bioconda-). @@ -84,4 +84,4 @@ Once set up, run the following from the root directory: ```sh python -m unittest discover tests ``` -*Note: This step will take a few minutes to run* \ No newline at end of file +*Note: This step will take a few minutes to run*