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Fixing "Module not found" Error #2

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Fixing "Module not found" Error #2

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c3f8646
fixed some "Module not found" issues
Wayne42 May 13, 2021
52b2dfe
Update README.md
Wayne42 May 13, 2021
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6 changes: 5 additions & 1 deletion README.md
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Expand Up @@ -23,6 +23,8 @@ Python Requirements

The repDNA was tested to work under Python 2.7, 3.3 and 3.4 on Windows, Mac and Linux.

Update: Tested with 3.9.2 on Windows, seems to work. (13.05.2021)


Installation
============
Expand All @@ -37,4 +39,6 @@ Otherwise, download and unzip the repDNA package, go to the directory, and type:

or

`sudo python setup.py install`
`sudo python setup.py install`

Note: If you use windows, you might need to elevate your CMD.
2 changes: 1 addition & 1 deletion repDNA/ac.py
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@@ -1,6 +1,6 @@
__author__ = 'Fule Liu'

from util import get_data, generate_phyche_value
from .util import get_data, generate_phyche_value
from functools import reduce


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4 changes: 2 additions & 2 deletions repDNA/nac.py
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@@ -1,8 +1,8 @@
__author__ = 'Fule Liu'


from nacutil import make_upto_kmer_list, make_revcomp_kmer_list, make_kmer_vector
from util import get_data
from .nacutil import make_upto_kmer_list, make_revcomp_kmer_list, make_kmer_vector
from .util import get_data


def check_nac_para(k, normalize=False, upto=False, alphabet='ACGT'):
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2 changes: 1 addition & 1 deletion repDNA/nacutil.py
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Expand Up @@ -6,7 +6,7 @@
import math
import itertools

from util import frequency
from .util import frequency


def make_kmer_list(k, alphabet):
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4 changes: 2 additions & 2 deletions repDNA/psenac.py
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@@ -1,7 +1,7 @@
__author__ = 'Fule Liu'

from util import get_data
from psenacutil import extend_phyche_index
from .util import get_data
from .psenacutil import extend_phyche_index


def check_psenac(lamada, w, k):
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4 changes: 2 additions & 2 deletions repDNA/psenacutil.py
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Expand Up @@ -5,8 +5,8 @@
import pickle
from math import pow

from util import frequency
from nacutil import make_kmer_list
from .util import frequency
from .nacutil import make_kmer_list


ALPHABET = 'ACGT'
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