From be9b9cfea7e8fa6c77e09c4b43c28034f83fe6b9 Mon Sep 17 00:00:00 2001 From: Bob Date: Thu, 18 Dec 2025 17:15:28 +0000 Subject: [PATCH 1/2] Preliminary rationalisation --- DESCRIPTION | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 55a2df6..7158f85 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: microbiomeComputations Title: Compute Results for Microbiome Analyses -Version: 5.1.7 +Version: 5.2.0 Authors@R: c(person(given = "Danielle", family = "Callan", @@ -20,15 +20,14 @@ Imports: purrr, Rcpp (>= 0.11.0), S4Vectors, - SpiecEasi (>= 1.0.7), stringi, vegan, mbioUtils (>= 0.1.0) Depends: R (>= 2.10) Remotes: - microbiomeDB/mbioUtils, - zdk123/SpiecEasi@v1.0.7 + microbiomeDB/mbioUtils@vX.Y.Z, + bioc::3.22/Maaslin2 biocViews: LinkingTo: Rcpp URL: https://github.com/microbiomeDB/microbiomeComputations, https://microbiomedb.github.io/microbiomeComputations/ @@ -39,6 +38,7 @@ Encoding: UTF-8 LazyData: true Roxygen: list(markdown = TRUE) RoxygenNote: 7.3.3 +BiocViews: Suggests: testthat (>= 3.0.0) Config/testthat/edition: 3 From d7629b7f3edcdd9c1d2c1a4b92b64f45c60e7d21 Mon Sep 17 00:00:00 2001 From: Bob Date: Thu, 18 Dec 2025 19:21:52 +0000 Subject: [PATCH 2/2] remove fake version from mbioUtils --- DESCRIPTION | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index 7158f85..644cd3a 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -26,7 +26,7 @@ Imports: Depends: R (>= 2.10) Remotes: - microbiomeDB/mbioUtils@vX.Y.Z, + microbiomeDB/mbioUtils, bioc::3.22/Maaslin2 biocViews: LinkingTo: Rcpp