diff --git a/funannotate/aux_scripts/funannotate-runEVM.py b/funannotate/aux_scripts/funannotate-runEVM.py index 27ce8eb..574c9fb 100755 --- a/funannotate/aux_scripts/funannotate-runEVM.py +++ b/funannotate/aux_scripts/funannotate-runEVM.py @@ -576,7 +576,7 @@ def __init__(self, prog): else: outputDir = os.path.abspath(os.path.join(tmpdir, key)) cmd = [ - os.path.join(EVM, "evidence_modeler.pl"), + RunEVM, "-G", os.path.join(outputDir, os.path.basename(args.fasta)), "-g",