From 2e90ed933d6c17887a62ae7c76e58875e11ee0f2 Mon Sep 17 00:00:00 2001 From: feibendepiaoerbai <38779993+feibendepiaoerbai@users.noreply.github.com> Date: Tue, 19 Nov 2024 12:32:17 +0800 Subject: [PATCH 1/2] Update funannotate-runEVM.py --- funannotate/aux_scripts/funannotate-runEVM.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/funannotate/aux_scripts/funannotate-runEVM.py b/funannotate/aux_scripts/funannotate-runEVM.py index 27ce8eb..76e0795 100755 --- a/funannotate/aux_scripts/funannotate-runEVM.py +++ b/funannotate/aux_scripts/funannotate-runEVM.py @@ -576,7 +576,7 @@ def __init__(self, prog): else: outputDir = os.path.abspath(os.path.join(tmpdir, key)) cmd = [ - os.path.join(EVM, "evidence_modeler.pl"), + os.path.join(RunEVM, "evidence_modeler.pl"), "-G", os.path.join(outputDir, os.path.basename(args.fasta)), "-g", From d100146e11e9c3535f57dff44096a822dd94cc52 Mon Sep 17 00:00:00 2001 From: feibendepiaoerbai <38779993+feibendepiaoerbai@users.noreply.github.com> Date: Tue, 19 Nov 2024 14:08:12 +0800 Subject: [PATCH 2/2] Update funannotate-runEVM.py --- funannotate/aux_scripts/funannotate-runEVM.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/funannotate/aux_scripts/funannotate-runEVM.py b/funannotate/aux_scripts/funannotate-runEVM.py index 76e0795..574c9fb 100755 --- a/funannotate/aux_scripts/funannotate-runEVM.py +++ b/funannotate/aux_scripts/funannotate-runEVM.py @@ -576,7 +576,7 @@ def __init__(self, prog): else: outputDir = os.path.abspath(os.path.join(tmpdir, key)) cmd = [ - os.path.join(RunEVM, "evidence_modeler.pl"), + RunEVM, "-G", os.path.join(outputDir, os.path.basename(args.fasta)), "-g",