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Quality and adapter trimming of fastq sequences #2

@aakrosh

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@aakrosh

We need a workflow that uses TrimGalore for quality and adapter trimming of fastq sequences. TrimGalore (https://www.bioinformatics.babraham.ac.uk/projects/trim_galore) is a wrapper around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files, with some extra functionality for MspI-digested RRBS-type (Reduced Representation Bisufite-Seq) libraries.

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