added -frm 3 (FRM_ONE) for 1-based inclusive coords (Ensembl)#5
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brunocontrerasmoreira wants to merge 10 commits intoBioinformaticsToolsmith:masterfrom
Open
added -frm 3 (FRM_ONE) for 1-based inclusive coords (Ensembl)#5brunocontrerasmoreira wants to merge 10 commits intoBioinformaticsToolsmith:masterfrom
brunocontrerasmoreira wants to merge 10 commits intoBioinformaticsToolsmith:masterfrom
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Hi @hani-girgis , have you had the chance to look at this? Thanks |
add usage and better compile info
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Hi @hani-girgis (cc @ens-carlos), I was eventually able to compile Red.
I have added one more format for the exported repeat coordinates.
This is internally named FRMT_ONE and stands for 1-based inclusive coords, as used in Ensembl.
It can be requested with -frm 3 and produces files with .tsv extension.
Let me know if you need further information,
Bruno