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Adding pulsar-re into main #23

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Adding pulsar-re into main #23

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85a5231
Changes /storage to /auto
martindemko Oct 9, 2025
dc783fb
Try to catch up on origin/pulsar-re
martindemko Oct 9, 2025
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3 changes: 2 additions & 1 deletion group_vars/pulsarservers.yml
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
# Put your Galaxy server's fully qualified domain name (FQDN) (or the FQDN of the RabbitMQ server) above.
rabbitmq_hostname: "galaxy-umsa.grid.cesnet.cz" # DEMON: Important to have proper FQDN of connected Galaxy server (or at least RabbitMQ server)
rabbitmq_hostname: "galaxy-re.grid.cesnet.cz" # DEMON: Important to have proper FQDN of connected Galaxy server (or at least RabbitMQ server)
rabbitmq_vhost: "pulsar" # DEMON: must be the same rabbitmq vhost set for communication between Galaxy and Pulsar set on Galaxy side
rabbitmq_user: "{{ galaxy_user.name }}" # DEMON: must be user running connected Galaxy server
rabbitmq_port: 5671 # DEMON: must be port where to contact RabbitMQ server
Expand Down Expand Up @@ -93,6 +93,7 @@ pulsar_yaml_config:
postprocess_action_interval_start: 2
postprocess_action_interval_step: 2
postprocess_action_interval_max: 30
min_polling_interval: 60.0

# Pulsar should use the same job metrics plugins as Galaxy. This will automatically set `job_metrics_config_file` in
# `pulsar_yaml_config` and create `{{ pulsar_config_dir }}/job_metrics_conf.yml`.
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4 changes: 2 additions & 2 deletions pulsar.yml
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Expand Up @@ -66,7 +66,7 @@
- name: Mount NFS volume to share job data with worker nodes
ansible.posix.mount:
src: "storage-{{ galaxy_user.nfs_home }}.metacentrum.cz:/"
path: "/storage/{{ galaxy_user.nfs_home }}"
path: "/auto/{{ galaxy_user.nfs_home }}"
opts: "sec=krb5i,proto=tcp,port=2049,intr"
state: mounted
fstype: nfs4
Expand Down Expand Up @@ -145,7 +145,7 @@
become_user: "{{ galaxy_user.name }}"
- name: Create .drmaa folder in NFS home
ansible.builtin.file:
path: "/storage/{{ galaxy_user.nfs_home }}/home/{{ galaxy_user.name }}/.drmaa"
path: "/auto/{{ galaxy_user.nfs_home }}/home/{{ galaxy_user.name }}/.drmaa"
state: directory
become: yes
become_user: "{{ galaxy_user.name }}"
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