Skip to content

increase time allocated to split_fasta #43

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
tcezard merged 2 commits into from
Jan 27, 2025
Merged

increase time allocated to split_fasta #43

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
2f64d11
increase time allocated to split_fasta
tcezard Jan 23, 2025
ac09f88
Change the python version tested to 3.9
tcezard Jan 27, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion .github/workflows/variant_remapping.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@ jobs:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [3.8]
python-version: [3.9]

steps:
- uses: actions/checkout@v2
Expand Down
2 changes: 1 addition & 1 deletion variant_to_realignment.nf
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -126,7 +126,7 @@ process extractVariantInfoToFastaHeader {
* Split fasta entries into multiple chunks
*/
process split_fasta {
label 'short_time', 'small_mem'
label 'default_time', 'small_mem'

input:
path interleaved_fasta
Expand Down
Loading