CalciumInsights

CalciumInsights is an interactive application built in R designed to analyze tissue-agnostic calcium traces.

Installation

To install CalciumInsights R and RStudio are required:

https://cran.r-project.org/

https://posit.co/download/rstudio-desktop/

Packages

config (>= 0.3.1)
golem (>= 0.3.2)
shiny (>= 1.7.2)
shinydashboard
shinyjs
ggplot2
DT
gridExtra
mdatools
pracma
tidyverse
dplyr
reshape2
refund
fda
fds
reshape2
latex2exp
plotly
magrittr
png
prospectr

How to install the app

Only the first time the app is installed, enter the following command in the console

install.packages("remotes")

The following console command is to install from github

remotes::install_github("AOG-Lab/CalciumInsights")

Example

This is a basic example which shows you how to solve a common problem:

library(CalciumInsights)
run_app()