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[n-equals-one]

Assembly review request

• ToLID: xbPinRudi
• Species: Pinna rudis
• Project: ERGA-BGE
• Affiliation: SciLifeLab

[erga-ear-bot]

Attention @n-equals-one, the field Project: is missing or empty!
Please fix the issue by editing your first message (click on the three dots '…' in the top right corner of it)

[erga-ear-bot]

Hi @n-equals-one, thanks for sending the EAR of Pinna rudis.
I added the corresponding tag to the PR and will contact a supervisor and a reviewer ASAP.

[erga-ear-bot]

Hi @additive3, do you agree to supervise this assembly?
Please reply to this message only with OK to give acknowledge.

[additive3]

OK

[erga-ear-bot]

*****
EAR Reviewer Selection Process
Date: 2026-02-03 12:59

All Eligible Candidates:

Github ID     | Full Name             | Institution | Total Reviews | Last Review | Active | Working PRs | Calling Score | Adjusted Score
-----------------------------------------------------------------------------------------------------------------------------------------
EmilieTeo     | Emilie Teodori        | Genoscope   | 16            | 2026-02-02  | Y      | 1           | 1041          | 1071          
joannacollins | Jo Collins            | Sanger      | 7             | 2026-01-16  | Y      | 1           | 1027          | 1057          
DomAbsolon    | Dom Absolon           | Sanger      | 8             | 2025-11-04  | Y      | 1           | 1026          | 1056          
bistace       | Benjamin Istace       | Genoscope   | 12            | 2026-01-21  | Y      | 2           | 1046          | 1056          
jesgomez      | Jessica Gomez Garrido | CNAG        | 16            | 2026-02-02  | Y      | 1           | 1026          | 1056          
auryjm        | Jean-Marc Aury        | Genoscope   | 14            | 2026-01-27  | Y      | 2           | 1043          | 1053          
ldemirdj      | Lola Demirdjian       | Genoscope   | 14            | 2026-01-29  | Y      | 2           | 1043          | 1053          
additive3     | Jo Wood               | Sanger      | 8             | 2025-10-17  | Y      | 1           | 1026          | 1051          
CaroB-M       | Caroline Menguy       | Genoscope   | 18            | 2026-02-02  | Y      | 2           | 1040          | 1050          
msozzoni      | Marcella Sozzoni      | UNIFI       | 0             | NA          | Y      | 3           | 1007          | 1047          
talioto       | Tyler Alioto          | CNAG        | 9             | 2026-01-09  | Y      | 2           | 1032          | 1042          
tbrown91      | Tom Brown             | IZW         | 12            | 2026-01-22  | Y      | 0           | 995           | 1040          
gitcruz       | Fernando Cruz         | CNAG        | 14            | 2026-01-14  | Y      | 2           | 1029          | 1039          
diegomics     | Diego De Panis        | IZW         | 11            | 2025-09-22  | Y      | 0           | 993           | 1038          
tommathers    | Tom Mathers           | Sanger      | 7             | 2025-10-16  | Y      | 2           | 1027          | 1037          
SarahPelan    | Sarah Pelan           | Sanger      | 7             | 2025-12-19  | Y      | 2           | 1027          | 1037          

Selected reviewer: Emilie Teodori (EmilieTeo)
The decision was based on:
- different institution ('Genoscope')
- active ('Y')
- working on 1 PR(s) currently
- highest adjusted calling score in this particular selection (1071)
  (Note: Adjusted score already considering -20 points due to 1 ongoing PR(s))

[erga-ear-bot]

Hi @EmilieTeo, do you agree to review this assembly?
Please reply to this message only with Yes or No by 09-Feb-2026 at 17:59 CET

[erga-ear-bot]

@EmilieTeo Time is out! I will look for the next reviewer on the list :)

[erga-ear-bot]

*****
EAR Reviewer Selection Process
Date: 2026-02-09 21:39

All Eligible Candidates:

Github ID     | Full Name             | Institution | Total Reviews | Last Review | Active | Working PRs | Calling Score | Adjusted Score
-----------------------------------------------------------------------------------------------------------------------------------------
jesgomez      | Jessica Gomez Garrido | CNAG        | 17            | 2026-02-09  | Y      | 0           | 1026          | 1076          
EmilieTeo     | Emilie Teodori        | Genoscope   | 17            | 2026-02-09  | Y      | 1           | 1040          | 1070          
CaroB-M       | Caroline Menguy       | Genoscope   | 19            | 2026-02-04  | Y      | 1           | 1039          | 1069          
joannacollins | Jo Collins            | Sanger      | 7             | 2026-01-16  | Y      | 1           | 1030          | 1060          
DomAbsolon    | Dom Absolon           | Sanger      | 8             | 2025-11-04  | Y      | 1           | 1029          | 1059          
bistace       | Benjamin Istace       | Genoscope   | 13            | 2026-02-03  | Y      | 2           | 1045          | 1055          
additive3     | Jo Wood               | Sanger      | 8             | 2025-10-17  | Y      | 1           | 1029          | 1054          
auryjm        | Jean-Marc Aury        | Genoscope   | 14            | 2026-01-27  | Y      | 2           | 1043          | 1053          
ldemirdj      | Lola Demirdjian       | Genoscope   | 15            | 2026-02-04  | Y      | 2           | 1042          | 1052          
talioto       | Tyler Alioto          | CNAG        | 9             | 2026-01-09  | Y      | 2           | 1033          | 1043          
tommathers    | Tom Mathers           | Sanger      | 7             | 2025-10-16  | Y      | 2           | 1030          | 1040          
SarahPelan    | Sarah Pelan           | Sanger      | 7             | 2025-12-19  | Y      | 2           | 1030          | 1040          
tbrown91      | Tom Brown             | IZW         | 12            | 2026-01-22  | Y      | 0           | 995           | 1040          
gitcruz       | Fernando Cruz         | CNAG        | 14            | 2026-01-14  | Y      | 2           | 1030          | 1040          
diegomics     | Diego De Panis        | IZW         | 11            | 2025-09-22  | Y      | 0           | 993           | 1038          
msozzoni      | Marcella Sozzoni      | UNIFI       | 1             | 2026-02-05  | Y      | 2           | 1007          | 1017          

Selected reviewer: Jessica Gomez Garrido (jesgomez)
The decision was based on:
- different institution ('CNAG')
- active ('Y')
- working on 0 PR(s) currently
- highest adjusted calling score in this particular selection (1076)

[erga-ear-bot]

Hi @jesgomez, do you agree to review this assembly?
Please reply to this message only with Yes or No by 16-Feb-2026 at 02:38 CET

[jesgomez]

yes

[erga-ear-bot]

Thanks for agreeing!
I appointed you as the EAR reviewer.
I will track this as one of your Working PRs until you finish this review.
Please check the Wiki if you need to refresh something. (and remember that you must download the EAR PDF to be able to click on the link to the contact map file!)
Contact the PR assignee for any issues.

[additive3]

HI @n-equals-one

I'm currently working through this but there are some odd hapotype switching/retention events that I am trying to work out...
Update hopefully shortly.

[jesgomez]

Hi both, I started making some edits but I'll wait for @additive3 suggestions before movig on with mine.