Web-server for Pathopred

Description:

Front-end server for pathopred.
The web-server is developed with Django 1.11.15 LTS


This software is open source and licensed under the GPL license

Author

Based on software by Nanjiang Shu

Short-term bioinformatics support at NBIS

Email: nanjiang.shu@scilifelab.se

Installation

1. Install dependencies for the web server

   • Apache
   • mod_wsgi

2. Install the virtual environments by

   $ bash setup_virtualenv.sh

3. Create the django database db.sqlite3

4. Run

   $ bash init.sh

   to initialize the working folder

5. In the folder proj, create a softlink of the setting script.

   For development version

    $ ln -s dev_settings.py settings.py
   

   For release version

    $ ln -s pro_settings.py settings.py
   

   Note: for the release version, you need to create a file with secret key and stored at /etc/django_pro_secret_key.txt

6. On the computational node. run

   $ virtualenv env --system-site-packages

   to make sure that python can use all other system-wide installed packages