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the GMOD database schema
PLpgSQL 44 23
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 268 74
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 472 199
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 137 87
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
add AbortController support to a cache of async requests
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Parse BAM and BAM index files in javascript for node and the browser
Nodejs filehandle for reading bgzip+.gzi compressed files
Read CRAM v3 and v2 in node or in the browser
Parser for bigwig and bigbed files
Read JBrowse v1 nested containment list feature stores from modern JS
3D protein structure visualizer in jbrowse 2 - WIP
JBrowse 2 plugin for editing annotations on an Apollo server
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