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Auto vs allo ploidy

Status: Open.

#247 In KamilSJaron/smudgeplot;

· bshahid5 opened on Jan 26, 2026

Smudge report crashing. Inferred coverage 0?

potential problemsfor potential problems given different scenarios (How does XXX infulence sumdgeplot?)for potential problems given different scenarios (How does XXX infulence sumdgeplot?)

Status: Open.

#224 In KamilSJaron/smudgeplot;

· jychoilab opened on Nov 9, 2025

smudgeplot hetmers creates unspecific temporary files precluding parallel runs

enhancementNew feature or requestNew feature or request

Status: Open.

#223 In KamilSJaron/smudgeplot;

· alxsimon opened on Nov 6, 2025

QC genomes uring extracted k-mer pairs

0.9.9 SlidingFor the future release of sploidyplot_obj branchFor the future release of sploidyplot_obj branch

devfor issues related to development branchfor issues related to development branch

Status: Open.

#190 In KamilSJaron/smudgeplot;

· KamilSJaron opened on Feb 17, 2025

Prepare a testing battery

0.9.9 SlidingFor the future release of sploidyplot_obj branchFor the future release of sploidyplot_obj branch

devfor issues related to development branchfor issues related to development branch

genomescope included

smudgeplot includedif smudgeplot was posted with the quesiton / problemif smudgeplot was posted with the quesiton / problem

Status: Open.

#127 In KamilSJaron/smudgeplot;

· KamilSJaron opened on Aug 22, 2023

Bad examples of smudgeplot

smudgeplot includedif smudgeplot was posted with the quesiton / problemif smudgeplot was posted with the quesiton / problem

Status: Open.

#37 In KamilSJaron/smudgeplot;

· KamilSJaron opened on May 15, 2019

set up travis testing

performanceissues regarding scalability and performance of the method.issues regarding scalability and performance of the method.

Status: Open.

#8 In KamilSJaron/smudgeplot;

· KamilSJaron opened on Aug 24, 2018