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@LUDC-bioinformatics

LUDC Bioinformatics Unit

We provide bioinformatics, biostatistics and computational support to anyone affiliated with Lund University Diabetes Centre (LUDC)

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  1. musLingon_KarinB musLingon_KarinB Public

    Bulk RNA-Seq experiment of mice fed with lingon berries, high fat diet, low fat diet. PI: Karin Stenkula & Karin Berger <karin.stenkula@med.lu.se>

    Python

  2. SMC_MYOCD_splicing SMC_MYOCD_splicing Public

    Human RNA-Seq data to test whether myocarding is a splicing regulator. PI: Ola Hansson <ola.hansson@med.lu.se> & Karl Swärd <karl.sward@med.lu.se>

    Python

  3. SMC_MYOCD SMC_MYOCD Public

    Differential expression in the cultured human coronary artery smooth muscle cells (SMCs) induced by the Ad-CMV-MYOCD viral vector

    Python

  4. proteomic_FAK_adipose proteomic_FAK_adipose Public

    Study the role of focal adhesion kinase (FAK) in the adipose cells. PI: Karin Stenkula <karin.stenkula@med.lu.se>

  5. sc_vs_sn_engstrom sc_vs_sn_engstrom Public

    Seurat code for manuscript "Evaluating cell-specific gene expression using single-cell and single-nuclei RNA-sequencing data from human pancreatic islets of the same donors"

    R

Repositories

Showing 5 of 5 repositories
  • sc_vs_sn_engstrom Public

    Seurat code for manuscript "Evaluating cell-specific gene expression using single-cell and single-nuclei RNA-sequencing data from human pancreatic islets of the same donors"

    LUDC-bioinformatics/sc_vs_sn_engstrom’s past year of commit activity
    R 0 0 0 0 Updated Sep 1, 2025
  • proteomic_FAK_adipose Public

    Study the role of focal adhesion kinase (FAK) in the adipose cells. PI: Karin Stenkula <karin.stenkula@med.lu.se>

    LUDC-bioinformatics/proteomic_FAK_adipose’s past year of commit activity
    0 0 0 0 Updated Jun 18, 2025
  • musLingon_KarinB Public

    Bulk RNA-Seq experiment of mice fed with lingon berries, high fat diet, low fat diet. PI: Karin Stenkula & Karin Berger <karin.stenkula@med.lu.se>

    LUDC-bioinformatics/musLingon_KarinB’s past year of commit activity
    Python 0 0 0 0 Updated Jun 18, 2025
  • SMC_MYOCD_splicing Public

    Human RNA-Seq data to test whether myocarding is a splicing regulator. PI: Ola Hansson <ola.hansson@med.lu.se> & Karl Swärd <karl.sward@med.lu.se>

    LUDC-bioinformatics/SMC_MYOCD_splicing’s past year of commit activity
    Python 0 0 0 0 Updated Jun 18, 2025
  • SMC_MYOCD Public

    Differential expression in the cultured human coronary artery smooth muscle cells (SMCs) induced by the Ad-CMV-MYOCD viral vector

    LUDC-bioinformatics/SMC_MYOCD’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 18, 2025

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