MATLAB image processing scripts for confocal microscopy data
HiLo.m: Performs lowpass and highpass filtering for noise reduction ExtractNuclei.m: Identifies and enumerates nuclei in a DAPI image IntegrateFociIntensity.m: Loops through all nuclei in an image and accumulates pixel intensity in the non-DAPI (e.g. FITC) channel IntegrateFociIntensity_Wrapper.m: Processes a series of images with IntegrateFociIntensity