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1. gsmodutils gsmodutils Public

   A utility framework for the management of genome-scale metabolic models.

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2. cluster_query_tool cluster_query_tool Public

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3. CnecatorGSM CnecatorGSM Public

   Supplementary code and files for the manuscript "A genome-scale metabolic model of Cupriavidus necator H16 integrated with TraDIS and transcriptomic data reveals metabolic insights for biotechnolog…

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4. clau_supp clau_supp Public

   Supplementary Repository for gsmodutils

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5. Impact-of-Physicochemical-Parameters-on-thermodynamics-based-FBA Impact-of-Physicochemical-Parameters-on-thermodynamics-based-FBA Public

   This repository contains the Matlab files used for the calculations presented in "Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth…

6. C_auto_essentiality C_auto_essentiality Public

   Files for "Required gene set for autotrophic growth of Clostridium autoethanogenum"

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