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Merged
casperdcl merged 5 commits into from
Aug 13, 2025
Merged

CI: windows conda build & release #1918

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cdfaff9
CI: add windows
casperdcl Aug 30, 2024
3840436
tests: astra CPU override
casperdcl Aug 11, 2025
0e4e4a1
CI: conda-verify
casperdcl Aug 11, 2025
3f278eb
tests: increase tolerance for astra CPU 2D cone
casperdcl Aug 11, 2025
a1463f7
CI: reduce master matrix
casperdcl Aug 13, 2025
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38 changes: 24 additions & 14 deletions .github/workflows/build.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -66,10 +66,8 @@ jobs:
strategy:
matrix:
include:
- python-version: '3.10'
numpy-version: 1.23
- python-version: 3.12
numpy-version: 1.26
- {python-version: '3.10', numpy-version: 1.23}
- {python-version: 3.12, numpy-version: 1.26}
steps:
- uses: actions/checkout@v4
with: {fetch-depth: 0, submodules: recursive}
Expand All @@ -88,60 +86,72 @@ jobs:
outputs:
python-version: ${{ steps.matrix.outputs.python-version }}
numpy-version: ${{ steps.matrix.outputs.numpy-version }}
os: ${{ steps.matrix.outputs.os }}
steps:
- id: matrix
run: |
if ${{ github.ref == 'refs/heads/master' || startsWith(github.ref, 'refs/tags') || github.event_name == 'workflow_dispatch' }}; then
if ${{ startsWith(github.ref, 'refs/tags') || github.event_name == 'workflow_dispatch' }}; then
echo "python-version=['3.10', 3.11]" >> $GITHUB_OUTPUT
echo "numpy-version=[1.23, 1.24, 1.25, 1.26]" >> $GITHUB_OUTPUT
echo "os=['ubuntu', 'windows']" >> $GITHUB_OUTPUT
else
echo "python-version=['3.10']" >> $GITHUB_OUTPUT
echo "numpy-version=[1.23]" >> $GITHUB_OUTPUT
if ${{ github.ref == 'refs/heads/master' }}; then
echo "os=['ubuntu', 'windows']" >> $GITHUB_OUTPUT
else
echo "os=['ubuntu']" >> $GITHUB_OUTPUT
fi
fi
conda:
defaults: {run: {shell: 'bash -el {0}'}}
runs-on: ubuntu-22.04
runs-on: ${{ matrix.os }}-${{ matrix.os == 'ubuntu' && '22.04' || 'latest' }}
needs: conda-matrix
strategy:
matrix:
python-version: ${{ fromJson(needs.conda-matrix.outputs.python-version) }}
numpy-version: ${{ fromJson(needs.conda-matrix.outputs.numpy-version) }}
os: ${{ fromJson(needs.conda-matrix.outputs.os) }}
include:
- python-version: 3.12
numpy-version: 1.26
- {python-version: 3.12, numpy-version: 1.26, os: ubuntu}
- {python-version: 3.12, numpy-version: 1.26, os: windows}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
submodules: recursive
ref: ${{ github.event.pull_request.head.sha || github.ref }} # fix SHA
- if: matrix.os == 'windows'
uses: ilammy/msvc-dev-cmd@v1
- uses: conda-incubator/setup-miniconda@v3
with:
python-version: ${{ matrix.python-version }}
mamba-version: "*"
channels: conda-forge
conda-remove-defaults: "true"
- run: conda install boa anaconda-client
- run: conda install boa conda-verify anaconda-client
- name: conda build & test
working-directory: recipe
run: |
conda mambabuild . -c conda-forge -c https://tomography.stfc.ac.uk/conda --override-channels --python=${{ matrix.python-version }} --numpy=${{ matrix.numpy-version }} --output-folder .
- uses: actions/upload-artifact@v4
with:
name: cil-package-py${{ matrix.python-version }}-np${{ matrix.numpy-version }}
path: recipe/linux-64/cil*
name: cil-package-${{ matrix.os }}-py${{ matrix.python-version }}-np${{ matrix.numpy-version }}
path: recipe/*/cil-*.tar.bz2
- name: anaconda upload -c ccpi
if: >
(github.ref == 'refs/heads/master' || startsWith(github.ref, 'refs/tags')) && matrix.numpy-version == '1.26'
run: |
anaconda -v -t ${{ secrets.CCPI_CONDA_TOKEN }} upload --force --label ${{ startsWith(github.ref, 'refs/tags') && 'main' || 'dev' }} recipe/linux-64/cil*
anaconda -v -t ${{ secrets.CCPI_CONDA_TOKEN }} upload --force --label ${{ startsWith(github.ref, 'refs/tags') && 'main' || 'dev' }} recipe/*/cil-*.tar.bz2
- name: conda upload -c tomography.stfc.ac.uk/conda
if: startsWith(github.ref, 'refs/tags')
run: |
echo '${{ secrets.STFC_SSH_KEY }}' > ./key
chmod 600 ./key
rsync -e 'ssh -o StrictHostKeyChecking=no -i ./key' -P recipe/linux-64/cil* \
'${{ secrets.STFC_SSH_HOST }}:${{ secrets.STFC_SSH_CONDA_DIR }}/linux-64/'
for plat in linux-64 win-64; do
rsync -e 'ssh -o StrictHostKeyChecking=no -i ./key' -P recipe/$plat/cil-*.tar.bz2 \
'${{ secrets.STFC_SSH_HOST }}:${{ secrets.STFC_SSH_CONDA_DIR }}/$plat/'
done
conda-reindex:
if: startsWith(github.ref, 'refs/tags')
needs: conda
Expand Down
2 changes: 1 addition & 1 deletion Wrappers/Python/test/test_PluginsAstra_CPU.py
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Original file line number Diff line number Diff line change
Expand Up @@ -71,7 +71,7 @@ class Test_Cone2D_Projectors_CPU_toy(unittest.TestCase, TestCommon_ProjectionOpe
def setUp(self):
setup_parameters(self)
self.Cone2D()
self.tolerance_linearity = 1e-7
self.tolerance_linearity = 2e-5
self.tolerance_norm = 1e-3


Expand Down
2 changes: 1 addition & 1 deletion recipe/meta.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ test:
- tigre 2.6
- packaging
- ccpi-regulariser 24.0.1 # [not osx]
- astra-toolbox 2.1 cuda* # [not osx]
- astra-toolbox 2.1 {{ 'cuda*' if environ.get('TESTS_FORCE_GPU', '') else 'py*' }}
- matplotlib-base >=3.3
- zenodo_get >=1.6

Expand Down
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