This repository holds the analyses, data and output for two projects related to the evolution of vessel morphology in plants.
Macroevolutionary analyses include two primary scripts that are found in the analysis folder. First, we performed an OUwie analysis in the file ./analysis/OUwieAnalysis_Freeze.Rmd (including code for matching of tree and original data sources). Second, we developed a novel method for relating a continuous predictor to vessel size and analyzed the data in the file ./analysis/ContinuousTheta_Freeze+Evergreen.Rmd. All relevant data is included in in the ./datasets/ folder.
Macroecological analyses are contained in two primary scripts in the analysis folder: *./analysis/non-phylogenetic-woody.R and ./analysis/non-phylogenetic-allplants.R. These generate outputs that can be found in the outputs folder (./outputs/nonphylo_models and *./outputs/figures).