Fasta subset by sequence #764
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added 2 commits
April 5, 2022 18:27
Merged Terry changes into branch
bamueh
approved these changes
Oct 8, 2024
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You could probably run black on this. |
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OMG, I only just saw this, sorry!
I'm not sure what to do. It's fine to merge this (running |
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terrycojones
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Script to read fastq and, given a pattern will output sequences to stout that contain this pattern. Applied case: look for TRS leader sequence in reads and pull out those reads that contain the sequence.
Changed on the way to deal with fastq instead of fasta.