v2.0.1

• sync hs2p to add support for background removal when encoding tiles (#46) and for HSV tissue seg (#48)
• improve support for using locally trained DINO models (#49)

v2.0.0

• replace preprocessing code with hs2p repo to avoid duplication and ease maintenance (#42)

v1.4.0

• add CONCH, kaiko, MUSK, PhikonV2 and Hibou tile-level FMs (#37)
• allow saving tile-level embeddings along side slide-level embeddings for slide-level FMs (#35)
• allow saving PRISM latents (#36)
• add kaiko's Midnight12k tile-level FM (#39)

v1.3.0

• merged package dependencies in a single requirement.in file (#31)
• added PR test to ensure consistency in tiling & embedding (with PRISM) script (#32)

v1.2.3

• restored deduplication logic to prevent duplicate tile features when number of tiles is not divisible by number of gpus (#29)

v1.2.2

• tiny round fix when loading and rescaling tissue mask (#26)
• improved logging when loading weights from local path (#26)
• improved safety when resume: true (#26)

v1.2.1

• updated ASAP to 2.2 (#24)
• fixed some issues when reading coordinates from an existing folder
• added H0-mini to list of supported tile encoder (#24)
• added code for feature extraction with our in-house DINO / DINOv2 models (#24)

v1.2.0

• fix SIGBUS error by moving from numpy mmap file to h5py datasets (#22)

v1.1.2

• fixed visualization bug due to wrong handling of tile_size_at_0
• fixed gpu oom / cpu oom errors when encoding large whole slides into tile-level features

v1.1.1

• remove need for common spacings when loading tissue mask
• improve gpu mem management
• improved distributed flexibility with fetching free port