smap - Summary Statistics Manipulation and Processing

The goal of smap is to provide convenience functions for the manipulation of GWAS summary statistics (in .parquet format) in a fast and efficient way that scales to hundreds of files.

Installation

You can install the development version of smap like so:

library(devtools)
install_github("comp-med/smap")

Getting Started

References

TODO

• Tests (w/ fixtures)
  • extract_genomic_region
  • get_feature_overlap
• Add two small example files
• Function to return by (rs)ID
• Function to return by p value filter