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catalamarti wants to merge 3 commits into from
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dont use get #238

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2dcb419
dont use get
catalamarti Mar 7, 2025
16d6409
use ::
catalamarti Mar 7, 2025
e0f298d
add development version
catalamarti Mar 7, 2025
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
Package: CodelistGenerator
Title: Identify Relevant Clinical Codes and Evaluate Their Use
Version: 3.4.0
Version: 3.4.0.900
Authors@R: c(
person("Edward", "Burn", email = "edward.burn@ndorms.ox.ac.uk",
role = c("aut", "cre"),
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2 changes: 1 addition & 1 deletion R/getRoutes.R
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Expand Up @@ -31,7 +31,7 @@ getRouteCategories <- function(cdm) {

# relate does form concept id with the classification established by
# doseFormToRoute
doseRouteData <- get("doseFormToRoute")
doseRouteData <- CodelistGenerator::doseFormToRoute

routeCategory <- cdm$concept_relationship |>
# get dose form available in the cdm
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2 changes: 1 addition & 1 deletion R/stratifyByRoute.R
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Expand Up @@ -43,7 +43,7 @@ stratifyByRouteCategory <- function(x, cdm, keepOriginal = FALSE){
}
checkmate::assertLogical(keepOriginal, len = 1)

doseRouteData <- get("doseFormToRoute")
doseRouteData <- CodelistGenerator::doseFormToRoute
tableCodelist <- paste0(omopgenerics::uniqueTableName(),
omopgenerics::uniqueId())

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2 changes: 1 addition & 1 deletion R/subsetOnRouteCategory.R
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Expand Up @@ -44,7 +44,7 @@ subsetOnRouteCategory <- function(x, cdm, routeCategory){
cli::cli_abort("routeCategory must be a character vector")
}

doseRouteData <- get("doseFormToRoute")
doseRouteData <- CodelistGenerator::doseFormToRoute

tableCodelist <- paste0(omopgenerics::uniqueTableName(),
omopgenerics::uniqueId())
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