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PhenoGraphTutorial

Made by Pankaj Gupta and Ashli Forbes


The following package is a loose tutorial in how to use PhenoGraph. Complete with notebook files for both 2D and 3D data labelled accordingly as well as function files stored seperately for cleanliness. It is recommended that these scripts be run in a place that has higher with at least 16 GB of ram in order to produce the images.

For more information on what PhenoGraph is and for a more general explanation, please check here for download or here for a relevant paper.

PhenoGraph is a visualization tool for those wanting to cluster by certain characteristics. A common use is using phenotype and genotype data in labs.

There is a video tutorial going to a youtube walkthrough located on the Brain Circuits YouTube listed here.

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