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Cannot detect a 300kb duplication

Status: Open.

#63 In fritzsedlazeck/Spectre;

· paillerv opened on Jan 25, 2026

is population-mode calling using vcf possible?

Status: Open.

#62 In fritzsedlazeck/Spectre;

· JoannaTan opened on Nov 14, 2025

Correct use of --ploidy-chr flag

Status: Open.

#59 In fritzsedlazeck/Spectre;

· leahkemp opened on Oct 24, 2025

spectre Population misses to write genotype of first sample when merging

Status: Open.

#54 In fritzsedlazeck/Spectre;

· johannesgeibel opened on Jul 22, 2025

Error when running with snv file

Status: Open.

#50 In fritzsedlazeck/Spectre;

· Akazhiel opened on May 23, 2025

--ploidy-chr flag

Status: Open.

#49 In fritzsedlazeck/Spectre;

· cogrho opened on May 11, 2025

genome size is too large causing error in creating output tbi index

Status: Open.

#48 In fritzsedlazeck/Spectre;

· ChenDepp opened on May 6, 2025

Abnormal karyotype detection

Status: Open.

#47 In fritzsedlazeck/Spectre;

· reshu23 opened on Mar 27, 2025

Error with chromosome M

Status: Open.

#46 In fritzsedlazeck/Spectre;

· gsneha26 opened on Mar 26, 2025

Spectre on Bioconda

enhancementNew feature or requestNew feature or request

Status: Open.

#45 In fritzsedlazeck/Spectre;

· Schmytzi opened on Mar 26, 2025

Coordinate <= 0 detected. Did you forget to use the -0 option?

Status: Open.

#44 In fritzsedlazeck/Spectre;

· zaka-edd opened on Mar 14, 2025

Question regarding columns in regions.bed and cnv.bed outputs

Status: Open.

#43 In fritzsedlazeck/Spectre;

· TrentPrall opened on Feb 28, 2025