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Timing CNVs for WGD Samples

Status: Open.

#20 In gerstung-lab/MutationTimeR;

· iozkaraca opened on Mar 22, 2024

Tutorial crashes at addMutTime()

Status: Open.

#19 In gerstung-lab/MutationTimeR;

· jeff-mandell opened on Dec 1, 2023

if <code>clonal_frequency</code> corresponds to <code>purity / abberrant cell fraction</code> from ascat

Status: Open.

#18 In gerstung-lab/MutationTimeR;

· ChelseaCHENX opened on Sep 9, 2023

Inquiry about the definition of each colnames in the output

Status: Open.

#17 In gerstung-lab/MutationTimeR;

· lincj1994 opened on Mar 15, 2023

If the minor_cn &gt;=2, the time is N/A

Status: Open.

#15 In gerstung-lab/MutationTimeR;

· FreyaVan opened on Oct 21, 2021

Example input structural variants

Status: Open.

#14 In gerstung-lab/MutationTimeR;

· iS4i4S opened on Aug 29, 2021

ablines in .plotTiming

Status: Open.

#13 In gerstung-lab/MutationTimeR;

· giovianco opened on Apr 15, 2021

Whole-exome data input

Status: Open.

#12 In gerstung-lab/MutationTimeR;

· carladosanjos opened on Mar 11, 2021

help in describing the input

Status: Open.

#11 In gerstung-lab/MutationTimeR;

· kzkedzierska opened on Jan 11, 2021

Reporting probabilities for all subclones

Status: Open.

#4 In gerstung-lab/MutationTimeR;

· mg14 opened on Feb 11, 2020