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  1. ngs ngs Public

    Supplementary data and code for the textbook Bioinformatics: A Practical Guide to Next Generation Sequencing Data Analysis

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  2. bioinfo-autoimmune bioinfo-autoimmune Public

    This repository provides the source code, scripts, and usage instructions that serve as supplementary materials for the book Bioinformatics of Autoimmune Diseases by Hamid D. Ismail. It is designed…

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  3. deepFEPS deepFEPS Public

    DeepFEPS is a bioinformatics toolkit that turns DNA, RNA, and protein FASTA files into powerful numerical features using modern ML/DL: ESM2, ProtBERT, DNABERT, autoencoders, Doc2Vec, Word2Vec/FastT…

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  4. hamiddi.github.io hamiddi.github.io Public

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  5. FEPS FEPS Public

    FEPS (Feature Extraction from Protein Sequences) is a web-based bioinformatics tool for computing 2765 sequence-derived protein features across 7 feature groups. It supports machine learning and de…