Biopython is a powerful python libaray used for bioinformatic analysis.
- Import sequences
- Running sequence alignment
- Phylogenetic tree drawing
- Required libaraies: numpy, pandas
- Download and install Biopython:
pip install biopython - To upgrade Biopython from an older version:
pip install biopython --upgrade - For more information, check website: https://biopython.org/wiki/Download
$ conda create -n ete3 python=3
$ conda activate ete3
$ conda install -c etetoolkit ete3 ete_toolchain
$ ete3 build check
- For more information about ete3, check website: http://etetoolkit.org/
This is a simplified manual for analyzing structural alignment and sequence alignment.