Figures from the manuscript "Allelic Association Analyses: Estimation Recommendations"
Code to reproduce the figures from the manuscript are given in separate files
R Data sets necessary to reproduce the figures are available from here
Data from the 1000 Genomes project, High coverage version, can be downloaded from here. We restricted the analyses in the article to the original 2504 samples sequenced in phase 3 and used only bi-allelic SNPs from the 22 autosomes.
The file describing the 3202 individuals present in this high coverage dataset can be downloaded from here
The file describing the subset of 2504 individuals we kept for our analyses (original set of individuals from phase 3) can be downloaded from here