Support multiple input SAM/BAM files (v2)#146
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mmokrejs wants to merge 1 commit intojts:masterfrom
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Add a wrapper loop around existing code so that users does not need to merge multiple BAM's together. We iterate over all input files while increasing internal counters and checking that we indeed poked onto same chromosome with same length as in a previously parsed BAM file. After that print out the statistics. I received same values when running the modified version on same BAM file. Running the modified version on same file twice (provided as 2 arguments on the command line) at least yields same 'Initial genome size estimate' values, the other numbers differ a bit.
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