Bigwig and bigbed parsing

This repository contains code for reading Bigbed and Bigwig format files. The code is from an earlier version of IGV, repackaged as an OSGi bundle for use in other projects.

Compiled jar file is available from maven repository https://nexus.bioviz.org/repository/maven-releases/.

To build

• Install gradle
• Execute gradle jar to create the artifacts

To deploy to a maven repository

• Edit build.gradle with address of target repository and credentials
• Execute gradle uploadArchives

This will deploy compiled artifact and source code.

Contribution guidelines

• Fork this repository
• Make changes on a topic branch
• Submit a pull request from topic branch to master branch

Who do I talk to?

• Ann Loraine (aloraine@uncc.edu)