Run pyright with standard checks

[jenshnielsen]

This basically means checking that overrides are compatible with the base class

• Merge Upgrade pyright to 1.1.349 #5659 before this one
• Handle TODOs (remaining todos handled via Make command caller get/set_raw a method #5724)
• Are we ok with the breaking changes
• Document the breaking changes

Breaking changes

• The first argument to NumpyJSONEncoder.default is not o not obj. I don't expect this to be called directly. Only public so it can be passed to a json encoder.
• Unused arguments to QDac connect_messsage have changed. Not an issue since they are unused.
• Keysight N52XX and Infiniium Unused arguments to stub setpoints and unit methods have changed from val to setpoints / unit. Not an issue since these are unused stubs.
• Alazar DemodulationAcquisitionController handle_data argument changed from data to buffer. Probably unlikely to be called as a kwarg.
• InstrumentModule/Channel obj -> value in Sequence/MutableSequence methods. IMHO unlikely to be called by arg since these are simple single argument methods. Left this one out for now and ignored the warnings
• Private: but could still be used in other drivers parameter._wrap_set and _wrap_get no longer takes an argument.

[codecov]

Codecov Report

Attention: 11 lines in your changes are missing coverage. Please review.

Comparison is base (7e61922) 67.55% compared to head (5ebbaaa) 67.54%.

Files	Patch %	Lines
src/qcodes/tests/dataset/conftest.py	0.00%	9 Missing ⚠️
..._drivers/AlazarTech/ATS_acquisition_controllers.py	0.00%	1 Missing ⚠️
src/qcodes/instrument_drivers/Keysight/KtM960x.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #5721      +/-   ##
==========================================
- Coverage   67.55%   67.54%   -0.02%     
==========================================
  Files         348      348              
  Lines       30246    30251       +5     
==========================================
- Hits        20434    20433       -1     
- Misses       9812     9818       +6     

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