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How to optimize/speed up the ./orthograph-reporter operation?

Status: Open.

#41 In mptrsen/Orthograph;

· shirleyye2024 opened on May 26, 2025

Which gz file in OB11 should I download?

Status: Open.

#40 In mptrsen/Orthograph;

· auto-simi opened on Jul 18, 2024

Under utilization of computational resources in cluster

Status: Open.

#39 In mptrsen/Orthograph;

· CristianBezaBeza opened on Apr 30, 2023

--cog-list-file

Status: Open.

#38 In mptrsen/Orthograph;

· CristianBezaBeza opened on May 5, 2022

Identical gene names in different official gene sets lead to an omission of these genes

Status: Open.

#37 In mptrsen/Orthograph;

· cmayer opened on Mar 18, 2021

--help without --configfile

Status: Open.

#23 In mptrsen/Orthograph;

· alephreish opened on Jul 1, 2016

Automate COG table import

Status: Open.

#21 In mptrsen/Orthograph;

· mptrsen opened on Apr 21, 2016

Write a sequence class.

Status: Open.

#14 In mptrsen/Orthograph;

· mptrsen opened on Dec 13, 2012

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Modularize output