The envirotyping package is meant to provide useful functions for
gathering and manipulating environmental data (weather, climate, soil
data, etc.) for use in quantitative genetic or plant breeding modeling
and predictions.
To install this package, you can use devtools to install
envirotyping from its GitHub repository:
# install.packages("devtools")
devtools::install_github("neyhartj/envirotyping")The package vignette demonstrates a complete workflow, including:
- Querying weather and soil data from remote databases
- Running a crop model
- Summarizing weather data by growth stages
- Creating an environmental covariance matrix
- Using environmental data in genomewide prediction