NuClick

Clicks inside the nuclei or draw a scribble inside glands to obtain segmentation. This is Keras implementation of NuClick (link to paper )

Inference:

Download weights for nucleus segmentation from here and save it inside weights folder:

• Set application in the config.py
• Run test.py to use the interface.

To apply it on the existing detection points:

• Save points in the .mat format: first column x
• Define directories in the config.py: mat_path = '' , images_path = '' and save_path = ''
• run test_all_images