cambiotraining

All

67 repositories

quarto-course-template
Public
Lua
•
Other
•6•6•10•0•Updated Jan 5, 2026Jan 5, 2026
ml-unsupervised
Public
Supporting course materials for the Applied Unsupervised Machine Learning course
Python
•
Other
•1•1•11•0•Updated Jan 4, 2026Jan 4, 2026
viral-genomics
Public
Course materials for "Working with Viral Genomes"
Lua
•
Other
•0•0•0•0•Updated Dec 17, 2025Dec 17, 2025
crit-gh-actions
Public
Custom GitHub actions used by CRIT in course materials repositories
Python
•1•0•0•0•Updated Dec 17, 2025Dec 17, 2025
expression-proteomics
Public
Course materials for "Analysis of expression Proteomics data in R"
Lua
•
Other
•5•0•0•0•Updated Dec 16, 2025Dec 16, 2025
gwas
Public
Course materials for "Genome Wide Association Studies (GWAS)"
Lua
•
Other
•1•0•4•0•Updated Dec 16, 2025Dec 16, 2025
awd-pathogen-bioinformatics
Public
Materials for "Introduction to Cholera Genomics" course
Shell
•
Other
•1•3•9•0•Updated Dec 15, 2025Dec 15, 2025
corestats
Public
These materials support the Core statistics sessions, run through the Centre for Research Informatics Training at the University of Cambridge.
statistics python-programming r-programming
Python
•
MIT License
•8•5•19•0•Updated Dec 3, 2025Dec 3, 2025
metagenomics
Public
Course materials for "Introduction to Metagenomics"
Lua
•
Other
•2•2•3•0•Updated Nov 18, 2025Nov 18, 2025
bacterial-genomics
Public
Course materials for "Working with Bacterial Genomes"
Python
•
Other
•4•1•4•0•Updated Nov 12, 2025Nov 12, 2025
data-analysis-in-r-and-python
Public
Lua
•
Other
•2•1•9•0•Updated Nov 4, 2025Nov 4, 2025
hpc-intro
Public
Practical course on running jobs on a HPC
Shell
•
Other
•16•21•15•0•Updated Oct 27, 2025Oct 27, 2025
mcb-python
Public
Jupyter Notebook
•0•0•0•0•Updated Oct 22, 2025Oct 22, 2025
bioinformatics-software-pipelines
Public
Course materials for "Managing Bioinformatics Software and Pipelines"
Lua
•
Other
•4•3•11•0•Updated Oct 17, 2025Oct 17, 2025
crit-quarto-ext
Public
Quarto extensions developed and used by CRIT in course materials
Lua
•0•0•0•0•Updated Sep 26, 2025Sep 26, 2025
software-installation
Public
Software installation instructions
Lua
•
Other
•0•1•2•0•Updated Sep 25, 2025Sep 25, 2025
mb-intro-to-stats
Public
Lua
•
Other
•0•0•0•0•Updated Sep 25, 2025Sep 25, 2025
unix-shell
Public
Materials for "Introduction to Unix Shell" course.
Lua
•
Other
•6•5•12•0•Updated Sep 12, 2025Sep 12, 2025
working-with-git
Public
Basics of working with Git
Lua
•
Other
•1•0•0•0•Updated Sep 10, 2025Sep 10, 2025
cambiotraining.github.io
Public
Landing page for Cambridge bioinformatics training
HTML
•0•1•0•0•Updated Sep 5, 2025Sep 5, 2025
hpc-intro-sanger
Public
Introduction to HPC for Sanger DTP
Lua
•
Other
•2•2•4•0•Updated Sep 3, 2025Sep 3, 2025
stats-mixed-effects-models
Public
statistics linear-mixed-effects
Lua
•
Other
•2•5•15•0•Updated Aug 5, 2025Aug 5, 2025
stats-glm
Public
statistics python-programming r-programming generalised-linear-models
JavaScript
•
Other
•2•2•10•0•Updated Jul 25, 2025Jul 25, 2025
stats-survival-analysis
Public
Lua
•
Other
•0•0•0•0•Updated Jun 19, 2025Jun 19, 2025
stats-simulation
Public
Python
•
Other
•0•1•0•0•Updated Jun 9, 2025Jun 9, 2025
experimental-design
Public
Python
•
Other
•1•0•2•0•Updated Apr 3, 2025Apr 3, 2025
stats-mva
Public
Materials supporting the Multivariate analysis sessions
statistics python-programming pca kmeans-clustering r-programming hierarchical-clustering multivariate-analysis
Python
•
Other
•1•1•0•0•Updated Sep 27, 2024Sep 27, 2024
stats-bbs-linear-models
Public
Practical materials for the NST Part II BBS Bioinformatics course
statistics linear-regression undergraduate
Python
•
Other
•1•1•0•0•Updated Sep 20, 2024Sep 20, 2024
stats-resampling
Public
statistics python-programming resampling r-programming advanced-stats
Python
•
Other
•0•0•0•0•Updated Sep 20, 2024Sep 20, 2024
visual-data-communication
Public
A course to learn the basics on communicating data effectively, using visualisation.
data-visualisation r-programming data-communication
Lua
•
Other
•2•2•3•0•Updated Sep 20, 2024Sep 20, 2024