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@scientificcomputing Scientific Computing at Simula Research Laboratory

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    29 repositories

    • mri-toolkit

      Public
      MRI-toolkit provides a set of features dedicated to human MRI data post-processing
      image-processingmrimri-brain
      Python
      •
      Other
      •0•0•1•1•Updated Feb 10, 2026Feb 10, 2026

    • scifem

      Public
      Scientific finite element toolbox
      Python
      •
      MIT License
      •5•32•22•4•Updated Feb 9, 2026Feb 9, 2026

    • fenicsx_ii

      Public
      A reimplementation of some of the functionality from MiroK's FEniCS_ii (FEniCS trace)
      Python
      •
      MIT License
      •2•2•4•2•Updated Feb 4, 2026Feb 4, 2026

    • emimesh

      Public
      Python
      •
      MIT License
      •0•0•1•0•Updated Feb 2, 2026Feb 2, 2026

    • scientificcomputing.github.io

      Public
      Creative Commons Attribution 4.0 International
      •1•0•11•2•Updated Jan 22, 2026Jan 22, 2026

    • fenicsx_jax

      Public
      Example of how to interface JAX and FEniCSx using external operators
      Python
      •
      GNU Lesser General Public License v3.0
      •0•0•0•0•Updated Jan 17, 2026Jan 17, 2026

    • example-paper

      Public template
      Example of paper with code
      Python
      •
      MIT License
      •2•5•0•0•Updated Dec 18, 2025Dec 18, 2025

    • mri2mesh

      Public
      Brain meshing pipeline from MRI using pyvista, scikit-image and ftetwild
      Python
      •
      MIT License
      •0•3•0•0•Updated Dec 17, 2025Dec 17, 2025

    • fenics-in-the-wild

      Public
      Jupyter Notebook
      •
      MIT License
      •0•2•1•4•Updated Dec 15, 2025Dec 15, 2025

    • kg-jebsen-brain-fluid

      Public
      Meta repository for project planning and resource collection for K.G. Jebsen center for brain fluids
      MIT License
      •0•1•4•0•Updated Dec 8, 2025Dec 8, 2025

    • networks_fenicsx

      Public
      Python
      •
      MIT License
      •4•4•7•5•Updated Nov 24, 2025Nov 24, 2025

    • repo-review

      Public
      Tool to review repositories for compliance with Simula's repository policies.
      Python
      •0•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • generate-paper

      Public
      A cookiecutter template for generating the shell structure of a scientific paper
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 29, 2025Oct 29, 2025

    • packages

      Public
      A collection of package-recipes and publish actions
      Dockerfile
      •
      MIT License
      •3•9•1•2•Updated Oct 28, 2025Oct 28, 2025

    • vtk-aarch64

      Public
      Repo to host vtk-aarch64 wheels
      MIT License
      •0•0•0•0•Updated May 26, 2025May 26, 2025

    • quarteroni-sciml-2025-journal-club

      Public archive
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Mar 6, 2025Mar 6, 2025

    • staged-recipes

      Public
      A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5.7k•1•0•0•Updated Oct 2, 2024Oct 2, 2024

    • fenics2024

      Public
      Source files for building book of abstracts for FEniCS 2024 conference
      Python
      •
      MIT License
      •2•2•0•0•Updated Jun 19, 2024Jun 19, 2024

    • example-paper-fenics

      Public template
      Example paper using FEniCS
      paperfenics
      Python
      •
      MIT License
      •2•2•0•0•Updated May 2, 2024May 2, 2024

    • emix

      Public
      Common repository for software related to the EMIx project @ Simula Research Laboratory
      MIT License
      •0•0•2•1•Updated Apr 5, 2024Apr 5, 2024

    • phd-retreat-190324

      Public
      Material for phd retreat at Holmen Fjorhotel March 19th 2024
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Mar 18, 2024Mar 18, 2024

    • mpi-tutorial

      Public
      An MPI tutorial in Python
      pythonmpiipyparallelmpi4pyfenicsx
      Jupyter Notebook
      •
      MIT License
      •2•5•5•0•Updated Jan 5, 2024Jan 5, 2024

    • repo-stats

      Public
      Get stats from GitHub repo, pypi, conda and launchpad
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 24, 2023Nov 24, 2023

    • seminar-23-11-2023

      Public
      Material for BioAI seminar November 23rd 2023
      TeX
      •
      Creative Commons Attribution 4.0 International
      •1•2•0•0•Updated Nov 23, 2023Nov 23, 2023

    • perivascular-peristalsis

      Public
      Software and scripts for estimating the net effect of peristalsis in perivascular networks
      Jupyter Notebook
      •2•1•0•0•Updated Aug 25, 2023Aug 25, 2023

    • generate-python-package

      Public
      Repository using cookiecutter for project templates.
      reproducibilitypythonpackagecokkiecutter
      Python
      •
      MIT License
      •0•0•1•0•Updated May 2, 2023May 2, 2023

    • example-python-package

      Public template
      A template for Python packages
      Dockerfile
      •
      MIT License
      •4•6•1•0•Updated May 2, 2023May 2, 2023

    • paper-with-code

      Public archive
      Guidelines on how to publish code together with your research paper
      MIT License
      •0•4•0•0•Updated Dec 1, 2022Dec 1, 2022

    • .github

      Public
      Special github repo for readme of organization
      0•0•0•0•Updated Nov 24, 2022Nov 24, 2022