we are testing our data with bseqsc, while occurs the errror:
> fit <- bseqsc_proportions(skinbulkset, B, verbose = TRUE)
* Data features: 'MAP2K6', 'HK2', ..., 'RP11-412H9.2' (11,262 total)
* Basis features: 'LMX1A', 'CACNA2D1', ..., 'COL4A1' (198 total)
* Common features: 'DSCAML1', 'CACNA1B', ..., 'C12orf55' (133 total)
* Converting to linear scale
* Writing input files ... OK
* Running CIBERSORT ... Error in out[[t]]$coefs : $ operator is invalid for atomic vectors
In addition: Warning message:
In parallel::mclapply(1:svn_itor, res, mc.cores = svn_itor) :
all scheduled cores encountered errors in user code
Any advice provided is appreciated.
